Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS07040

Experiment: Chlorite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS07035 and AZOBR_RS07040 are separated by 129 nucleotidesAZOBR_RS07040 and AZOBR_RS07045 are separated by 56 nucleotidesAZOBR_RS07045 and AZOBR_RS07050 are separated by 27 nucleotides AZOBR_RS07035: AZOBR_RS07035 - dihydropteroate synthase, at 1,488,391 to 1,489,551 _RS07035 AZOBR_RS07040: AZOBR_RS07040 - phosphoglucosamine mutase, at 1,489,681 to 1,491,048 _RS07040 AZOBR_RS07045: AZOBR_RS07045 - phosphomethylpyrimidine kinase, at 1,491,105 to 1,491,905 _RS07045 AZOBR_RS07050: AZOBR_RS07050 - transcriptional regulator, at 1,491,933 to 1,493,327 _RS07050 Position (kb) 1489 1490 1491 1492Strain fitness (log2 ratio) -2 -1 0 1at 1489.567 kb on - strandat 1489.567 kb on - strandat 1489.650 kb on + strandat 1489.650 kb on + strandat 1491.046 kb on + strandat 1491.046 kb on + strandat 1491.047 kb on - strandat 1491.903 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Chlorite 1 mM
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1,489,567 - -0.9
1,489,567 - -1.4
1,489,650 + +0.4
1,489,650 + -2.0
1,491,046 + +0.2
1,491,046 + +1.3
1,491,047 - +1.4
1,491,903 + -0.6

Or see this region's nucleotide sequence