Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04080 and AZOBR_RS04085 are separated by 108 nucleotides AZOBR_RS04085 and AZOBR_RS04090 are separated by 21 nucleotides AZOBR_RS04090 and AZOBR_RS04095 are separated by 11 nucleotides
AZOBR_RS04080: AZOBR_RS04080 - cytochrome C, at 858,892 to 859,758
_RS04080
AZOBR_RS04085: AZOBR_RS04085 - membrane protein, at 859,867 to 860,610
_RS04085
AZOBR_RS04090: AZOBR_RS04090 - haloacid dehalogenase, at 860,632 to 861,300
_RS04090
AZOBR_RS04095: AZOBR_RS04095 - glutamate 5-kinase, at 861,312 to 862,442
_RS04095
Position (kb) 859
860
861 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 859.124 kb on - strand, within AZOBR_RS04080 at 859.297 kb on + strand, within AZOBR_RS04080 at 859.297 kb on + strand, within AZOBR_RS04080 at 859.297 kb on + strand, within AZOBR_RS04080 at 859.298 kb on - strand, within AZOBR_RS04080 at 859.298 kb on - strand, within AZOBR_RS04080 at 859.298 kb on - strand, within AZOBR_RS04080 at 859.423 kb on + strand, within AZOBR_RS04080 at 859.432 kb on + strand, within AZOBR_RS04080 at 859.433 kb on - strand, within AZOBR_RS04080 at 859.433 kb on - strand, within AZOBR_RS04080 at 859.640 kb on + strand, within AZOBR_RS04080 at 859.640 kb on + strand, within AZOBR_RS04080 at 859.685 kb on - strand at 859.685 kb on - strand at 859.687 kb on + strand at 859.687 kb on + strand at 859.687 kb on + strand at 859.688 kb on - strand at 859.688 kb on - strand at 859.738 kb on - strand at 859.808 kb on + strand at 859.829 kb on - strand at 859.829 kb on - strand at 860.038 kb on + strand, within AZOBR_RS04085 at 860.230 kb on + strand, within AZOBR_RS04085 at 860.230 kb on + strand, within AZOBR_RS04085 at 860.230 kb on + strand, within AZOBR_RS04085 at 860.231 kb on - strand, within AZOBR_RS04085 at 860.297 kb on - strand, within AZOBR_RS04085 at 860.456 kb on - strand, within AZOBR_RS04085 at 860.588 kb on - strand at 861.063 kb on - strand, within AZOBR_RS04090 at 861.134 kb on + strand, within AZOBR_RS04090 at 861.135 kb on - strand, within AZOBR_RS04090 at 861.170 kb on + strand, within AZOBR_RS04090
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 859,124 - AZOBR_RS04080 0.27 +0.3 859,297 + AZOBR_RS04080 0.47 +0.9 859,297 + AZOBR_RS04080 0.47 +1.0 859,297 + AZOBR_RS04080 0.47 -0.5 859,298 - AZOBR_RS04080 0.47 -1.7 859,298 - AZOBR_RS04080 0.47 +0.1 859,298 - AZOBR_RS04080 0.47 -1.1 859,423 + AZOBR_RS04080 0.61 +0.0 859,432 + AZOBR_RS04080 0.62 +0.3 859,433 - AZOBR_RS04080 0.62 -0.1 859,433 - AZOBR_RS04080 0.62 -2.8 859,640 + AZOBR_RS04080 0.86 -0.7 859,640 + AZOBR_RS04080 0.86 +1.9 859,685 - -2.1 859,685 - -0.0 859,687 + +0.6 859,687 + -0.8 859,687 + -0.1 859,688 - +0.1 859,688 - +0.2 859,738 - -0.9 859,808 + -0.4 859,829 - -2.2 859,829 - -0.1 860,038 + AZOBR_RS04085 0.23 -2.8 860,230 + AZOBR_RS04085 0.49 -1.2 860,230 + AZOBR_RS04085 0.49 +0.6 860,230 + AZOBR_RS04085 0.49 +0.6 860,231 - AZOBR_RS04085 0.49 -3.7 860,297 - AZOBR_RS04085 0.58 -0.2 860,456 - AZOBR_RS04085 0.79 -2.1 860,588 - -0.3 861,063 - AZOBR_RS04090 0.64 +0.6 861,134 + AZOBR_RS04090 0.75 -2.6 861,135 - AZOBR_RS04090 0.75 +0.4 861,170 + AZOBR_RS04090 0.80 +0.4
Or see this region's nucleotide sequence