Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03895 and AZOBR_RS03900 are separated by 11 nucleotides AZOBR_RS03900 and AZOBR_RS03905 are separated by 1 nucleotides
AZOBR_RS03895: AZOBR_RS03895 - hypothetical protein, at 822,321 to 823,928
_RS03895
AZOBR_RS03900: AZOBR_RS03900 - plasmid partitioning protein ParA, at 823,940 to 824,563
_RS03900
AZOBR_RS03905: AZOBR_RS03905 - hypothetical protein, at 824,565 to 825,953
_RS03905
Position (kb) 823
824
825 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 823.680 kb on + strand, within AZOBR_RS03895 at 823.681 kb on - strand, within AZOBR_RS03895 at 823.926 kb on + strand at 824.547 kb on - strand at 824.561 kb on + strand at 824.562 kb on - strand at 824.562 kb on - strand at 824.562 kb on - strand at 824.562 kb on - strand at 824.562 kb on - strand at 824.809 kb on + strand, within AZOBR_RS03905 at 824.810 kb on - strand, within AZOBR_RS03905 at 824.815 kb on + strand, within AZOBR_RS03905 at 824.815 kb on + strand, within AZOBR_RS03905 at 824.815 kb on + strand, within AZOBR_RS03905 at 824.815 kb on + strand, within AZOBR_RS03905 at 824.816 kb on - strand, within AZOBR_RS03905 at 824.816 kb on - strand, within AZOBR_RS03905 at 824.816 kb on - strand, within AZOBR_RS03905 at 825.041 kb on - strand, within AZOBR_RS03905 at 825.280 kb on + strand, within AZOBR_RS03905 at 825.280 kb on + strand, within AZOBR_RS03905 at 825.281 kb on - strand, within AZOBR_RS03905 at 825.313 kb on + strand, within AZOBR_RS03905 at 825.457 kb on + strand, within AZOBR_RS03905 at 825.469 kb on + strand, within AZOBR_RS03905
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 823,680 + AZOBR_RS03895 0.85 -0.4 823,681 - AZOBR_RS03895 0.85 +0.6 823,926 + -0.6 824,547 - -0.4 824,561 + -0.4 824,562 - +0.0 824,562 - +3.6 824,562 - -0.0 824,562 - -2.3 824,562 - -1.2 824,809 + AZOBR_RS03905 0.18 -1.7 824,810 - AZOBR_RS03905 0.18 +0.8 824,815 + AZOBR_RS03905 0.18 +0.2 824,815 + AZOBR_RS03905 0.18 -1.7 824,815 + AZOBR_RS03905 0.18 +0.5 824,815 + AZOBR_RS03905 0.18 +1.3 824,816 - AZOBR_RS03905 0.18 +0.9 824,816 - AZOBR_RS03905 0.18 +0.3 824,816 - AZOBR_RS03905 0.18 +0.3 825,041 - AZOBR_RS03905 0.34 -1.0 825,280 + AZOBR_RS03905 0.51 -0.0 825,280 + AZOBR_RS03905 0.51 +0.6 825,281 - AZOBR_RS03905 0.52 +0.4 825,313 + AZOBR_RS03905 0.54 -0.3 825,457 + AZOBR_RS03905 0.64 -0.6 825,469 + AZOBR_RS03905 0.65 +0.3
Or see this region's nucleotide sequence