Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03245 and AZOBR_RS03250 are separated by 65 nucleotides AZOBR_RS03250 and AZOBR_RS03255 are separated by 107 nucleotides AZOBR_RS03255 and AZOBR_RS03260 are separated by 87 nucleotides
AZOBR_RS03245: AZOBR_RS03245 - malate synthase, at 688,825 to 690,429
_RS03245
AZOBR_RS03250: AZOBR_RS03250 - hypothetical protein, at 690,495 to 690,929
_RS03250
AZOBR_RS03255: AZOBR_RS03255 - hypothetical protein, at 691,037 to 691,909
_RS03255
AZOBR_RS03260: AZOBR_RS03260 - acetyl-CoA carboxylase subunit alpha, at 691,997 to 692,953
_RS03260
Position (kb) 691
692 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 690.325 kb on + strand at 690.400 kb on + strand at 690.401 kb on - strand at 690.462 kb on - strand at 690.462 kb on - strand at 690.462 kb on - strand at 690.819 kb on + strand, within AZOBR_RS03250 at 690.820 kb on - strand, within AZOBR_RS03250 at 690.820 kb on - strand, within AZOBR_RS03250 at 691.220 kb on + strand, within AZOBR_RS03255 at 691.229 kb on + strand, within AZOBR_RS03255 at 691.326 kb on - strand, within AZOBR_RS03255 at 691.326 kb on - strand, within AZOBR_RS03255 at 691.326 kb on - strand, within AZOBR_RS03255 at 691.712 kb on + strand, within AZOBR_RS03255 at 691.712 kb on + strand, within AZOBR_RS03255 at 691.712 kb on + strand, within AZOBR_RS03255 at 691.712 kb on + strand, within AZOBR_RS03255 at 691.712 kb on + strand, within AZOBR_RS03255 at 691.713 kb on - strand, within AZOBR_RS03255 at 691.713 kb on - strand, within AZOBR_RS03255 at 691.721 kb on + strand, within AZOBR_RS03255 at 691.721 kb on + strand, within AZOBR_RS03255 at 691.754 kb on + strand, within AZOBR_RS03255 at 691.755 kb on - strand, within AZOBR_RS03255 at 691.755 kb on - strand, within AZOBR_RS03255 at 691.827 kb on - strand at 691.907 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 690,325 + -2.2 690,400 + -0.2 690,401 - +0.5 690,462 - -0.2 690,462 - -0.3 690,462 - -0.4 690,819 + AZOBR_RS03250 0.74 -0.0 690,820 - AZOBR_RS03250 0.75 -0.1 690,820 - AZOBR_RS03250 0.75 +3.2 691,220 + AZOBR_RS03255 0.21 +3.5 691,229 + AZOBR_RS03255 0.22 +0.7 691,326 - AZOBR_RS03255 0.33 +1.2 691,326 - AZOBR_RS03255 0.33 -0.2 691,326 - AZOBR_RS03255 0.33 +0.2 691,712 + AZOBR_RS03255 0.77 -0.6 691,712 + AZOBR_RS03255 0.77 -0.1 691,712 + AZOBR_RS03255 0.77 -0.8 691,712 + AZOBR_RS03255 0.77 +0.1 691,712 + AZOBR_RS03255 0.77 -0.3 691,713 - AZOBR_RS03255 0.77 -1.2 691,713 - AZOBR_RS03255 0.77 -3.9 691,721 + AZOBR_RS03255 0.78 +0.2 691,721 + AZOBR_RS03255 0.78 -2.6 691,754 + AZOBR_RS03255 0.82 -2.6 691,755 - AZOBR_RS03255 0.82 +0.7 691,755 - AZOBR_RS03255 0.82 +0.1 691,827 - +1.0 691,907 + +1.3
Or see this region's nucleotide sequence