Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02805 and AZOBR_RS02810 are separated by 741 nucleotides AZOBR_RS02810 and AZOBR_RS02815 are separated by 735 nucleotides
AZOBR_RS02805: AZOBR_RS02805 - hypothetical protein, at 595,133 to 595,927
_RS02805
AZOBR_RS02810: AZOBR_RS02810 - hypothetical protein, at 596,669 to 596,974
_RS02810
AZOBR_RS02815: AZOBR_RS02815 - hypothetical protein, at 597,710 to 597,889
_RS02815
Position (kb) 596
597 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 595.910 kb on + strand at 596.049 kb on - strand at 596.545 kb on + strand at 596.545 kb on + strand at 596.608 kb on + strand at 596.608 kb on + strand at 596.608 kb on + strand at 596.608 kb on + strand at 596.820 kb on - strand, within AZOBR_RS02810 at 596.934 kb on + strand, within AZOBR_RS02810 at 596.934 kb on + strand, within AZOBR_RS02810 at 596.935 kb on - strand, within AZOBR_RS02810 at 596.935 kb on - strand, within AZOBR_RS02810 at 596.935 kb on - strand, within AZOBR_RS02810 at 596.935 kb on - strand, within AZOBR_RS02810 at 596.935 kb on - strand, within AZOBR_RS02810 at 597.019 kb on + strand at 597.019 kb on + strand at 597.019 kb on + strand at 597.020 kb on - strand at 597.020 kb on - strand at 597.020 kb on - strand at 597.020 kb on - strand at 597.158 kb on + strand at 597.287 kb on + strand at 597.287 kb on + strand at 597.539 kb on - strand at 597.592 kb on - strand at 597.608 kb on + strand at 597.664 kb on + strand at 597.749 kb on + strand at 597.763 kb on + strand, within AZOBR_RS02815 at 597.764 kb on - strand, within AZOBR_RS02815 at 597.764 kb on - strand, within AZOBR_RS02815 at 597.764 kb on - strand, within AZOBR_RS02815 at 597.782 kb on + strand, within AZOBR_RS02815 at 597.889 kb on + strand at 597.890 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 595,910 + -0.7 596,049 - -2.1 596,545 + +0.0 596,545 + -2.1 596,608 + -0.1 596,608 + -0.5 596,608 + -0.3 596,608 + +0.4 596,820 - AZOBR_RS02810 0.49 +0.2 596,934 + AZOBR_RS02810 0.87 +0.2 596,934 + AZOBR_RS02810 0.87 -0.4 596,935 - AZOBR_RS02810 0.87 +2.0 596,935 - AZOBR_RS02810 0.87 +2.1 596,935 - AZOBR_RS02810 0.87 +0.2 596,935 - AZOBR_RS02810 0.87 -0.6 596,935 - AZOBR_RS02810 0.87 +1.8 597,019 + -0.1 597,019 + +0.4 597,019 + +0.8 597,020 - +1.7 597,020 - +1.3 597,020 - -0.3 597,020 - +0.2 597,158 + -0.1 597,287 + -1.6 597,287 + -1.4 597,539 - -0.3 597,592 - -1.0 597,608 + -2.9 597,664 + +0.6 597,749 + -0.3 597,763 + AZOBR_RS02815 0.29 -1.4 597,764 - AZOBR_RS02815 0.30 -0.7 597,764 - AZOBR_RS02815 0.30 +1.3 597,764 - AZOBR_RS02815 0.30 -2.7 597,782 + AZOBR_RS02815 0.40 -4.6 597,889 + +0.1 597,890 - -5.0
Or see this region's nucleotide sequence