Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02350 and AZOBR_RS02355 are separated by 794 nucleotides AZOBR_RS02355 and AZOBR_RS02360 are separated by 103 nucleotides AZOBR_RS02360 and AZOBR_RS02365 are separated by 191 nucleotides
AZOBR_RS02350: AZOBR_RS02350 - hypothetical protein, at 484,407 to 484,586
_RS02350
AZOBR_RS02355: AZOBR_RS02355 - hypothetical protein, at 485,381 to 485,752
_RS02355
AZOBR_RS02360: AZOBR_RS02360 - hypothetical protein, at 485,856 to 486,371
_RS02360
AZOBR_RS02365: AZOBR_RS02365 - hypothetical protein, at 486,563 to 487,030
_RS02365
Position (kb) 485
486 Strain fitness (log2 ratio) -2
-1
0
1 at 484.727 kb on + strand at 484.728 kb on - strand at 485.060 kb on - strand at 485.060 kb on - strand at 485.264 kb on + strand at 485.264 kb on + strand at 485.264 kb on + strand at 485.902 kb on + strand at 485.902 kb on + strand at 486.035 kb on - strand, within AZOBR_RS02360 at 486.064 kb on + strand, within AZOBR_RS02360 at 486.065 kb on - strand, within AZOBR_RS02360 at 486.692 kb on - strand, within AZOBR_RS02365
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 484,727 + -0.3 484,728 - +0.0 485,060 - +1.1 485,060 - -0.2 485,264 + +0.3 485,264 + +1.0 485,264 + -0.2 485,902 + -2.0 485,902 + -0.3 486,035 - AZOBR_RS02360 0.35 -0.2 486,064 + AZOBR_RS02360 0.40 -1.5 486,065 - AZOBR_RS02360 0.41 -1.3 486,692 - AZOBR_RS02365 0.28 -1.0
Or see this region's nucleotide sequence