Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01735 and AZOBR_RS01740 are separated by 6 nucleotides AZOBR_RS01740 and AZOBR_RS01745 are separated by 99 nucleotides AZOBR_RS01745 and AZOBR_RS01750 are separated by 48 nucleotides
AZOBR_RS01735: AZOBR_RS01735 - death-on-curing protein, at 355,464 to 355,907
_RS01735
AZOBR_RS01740: AZOBR_RS01740 - AbrB family transcriptional regulator, at 355,914 to 356,138
_RS01740
AZOBR_RS01745: AZOBR_RS01745 - membrane protein, at 356,238 to 356,666
_RS01745
AZOBR_RS01750: AZOBR_RS01750 - uroporphyrinogen decarboxylase, at 356,715 to 357,761
_RS01750
Position (kb) 355
356 Strain fitness (log2 ratio) -2
-1
0
1
2 at 354.817 kb on - strand at 354.817 kb on - strand at 354.903 kb on + strand at 354.904 kb on - strand at 355.311 kb on + strand at 355.312 kb on - strand at 355.312 kb on - strand at 355.466 kb on - strand at 355.504 kb on + strand at 355.504 kb on + strand at 355.505 kb on - strand at 355.505 kb on - strand at 355.505 kb on - strand at 355.744 kb on + strand, within AZOBR_RS01735 at 355.745 kb on - strand, within AZOBR_RS01735 at 355.759 kb on + strand, within AZOBR_RS01735 at 355.877 kb on - strand at 355.916 kb on - strand at 355.987 kb on + strand, within AZOBR_RS01740 at 356.171 kb on - strand at 356.171 kb on - strand at 356.183 kb on + strand at 356.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 354,817 - -1.8 354,817 - +0.2 354,903 + +0.0 354,904 - +0.3 355,311 + +0.5 355,312 - -1.1 355,312 - +0.4 355,466 - -0.3 355,504 + -0.2 355,504 + +1.9 355,505 - -0.5 355,505 - +1.2 355,505 - -0.4 355,744 + AZOBR_RS01735 0.63 +0.7 355,745 - AZOBR_RS01735 0.63 +1.1 355,759 + AZOBR_RS01735 0.66 -0.5 355,877 - -0.5 355,916 - -0.7 355,987 + AZOBR_RS01740 0.32 -0.4 356,171 - +0.3 356,171 - +0.0 356,183 + -0.2 356,232 - +0.3
Or see this region's nucleotide sequence