Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00785 and AZOBR_RS00790 are separated by 280 nucleotides AZOBR_RS00790 and AZOBR_RS00795 overlap by 1 nucleotides AZOBR_RS00795 and AZOBR_RS00800 are separated by 27 nucleotides
AZOBR_RS00785: AZOBR_RS00785 - argininosuccinate synthase, at 153,673 to 154,908
_RS00785
AZOBR_RS00790: AZOBR_RS00790 - hypothetical protein, at 155,189 to 155,500
_RS00790
AZOBR_RS00795: AZOBR_RS00795 - hypothetical protein, at 155,500 to 155,736
_RS00795
AZOBR_RS00800: AZOBR_RS00800 - 50S rRNA methyltransferase, at 155,764 to 156,933
_RS00800
Position (kb) 155
156 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 154.990 kb on + strand at 154.990 kb on + strand at 154.990 kb on + strand at 154.991 kb on - strand at 154.991 kb on - strand at 154.991 kb on - strand at 154.991 kb on - strand at 154.991 kb on - strand at 154.991 kb on - strand at 154.995 kb on - strand at 154.995 kb on - strand at 155.271 kb on + strand, within AZOBR_RS00790 at 155.272 kb on - strand, within AZOBR_RS00790 at 155.272 kb on - strand, within AZOBR_RS00790 at 155.272 kb on - strand, within AZOBR_RS00790 at 155.272 kb on - strand, within AZOBR_RS00790 at 155.272 kb on - strand, within AZOBR_RS00790 at 155.277 kb on + strand, within AZOBR_RS00790 at 155.277 kb on + strand, within AZOBR_RS00790 at 155.457 kb on + strand, within AZOBR_RS00790 at 155.458 kb on - strand, within AZOBR_RS00790 at 155.458 kb on - strand, within AZOBR_RS00790 at 156.090 kb on - strand, within AZOBR_RS00800 at 156.090 kb on - strand, within AZOBR_RS00800 at 156.365 kb on + strand, within AZOBR_RS00800 at 156.369 kb on + strand, within AZOBR_RS00800 at 156.370 kb on - strand, within AZOBR_RS00800 at 156.701 kb on + strand, within AZOBR_RS00800 at 156.702 kb on - strand, within AZOBR_RS00800
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 154,990 + +0.5 154,990 + +1.7 154,990 + +0.0 154,991 - -3.7 154,991 - -1.5 154,991 - +0.2 154,991 - -0.2 154,991 - -0.8 154,991 - +0.1 154,995 - -0.9 154,995 - +0.5 155,271 + AZOBR_RS00790 0.26 -0.1 155,272 - AZOBR_RS00790 0.27 +0.2 155,272 - AZOBR_RS00790 0.27 +0.6 155,272 - AZOBR_RS00790 0.27 +0.5 155,272 - AZOBR_RS00790 0.27 +1.0 155,272 - AZOBR_RS00790 0.27 +0.5 155,277 + AZOBR_RS00790 0.28 +0.5 155,277 + AZOBR_RS00790 0.28 -1.0 155,457 + AZOBR_RS00790 0.86 +1.6 155,458 - AZOBR_RS00790 0.86 -1.8 155,458 - AZOBR_RS00790 0.86 -0.4 156,090 - AZOBR_RS00800 0.28 +0.1 156,090 - AZOBR_RS00800 0.28 -0.7 156,365 + AZOBR_RS00800 0.51 -0.7 156,369 + AZOBR_RS00800 0.52 -1.0 156,370 - AZOBR_RS00800 0.52 -0.5 156,701 + AZOBR_RS00800 0.80 -0.9 156,702 - AZOBR_RS00800 0.80 +0.3
Or see this region's nucleotide sequence