Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00580 and AZOBR_RS00585 are separated by 44 nucleotides
AZOBR_RS00580: AZOBR_RS00580 - aminoglycoside phosphotransferase, at 115,253 to 116,266
_RS00580
AZOBR_RS00585: AZOBR_RS00585 - mannose-1-phosphate guanylyltransferase, at 116,311 to 117,048
_RS00585
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 115.353 kb on - strand at 115.583 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.712 kb on + strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand, within AZOBR_RS00580 at 115.713 kb on - strand at 115.832 kb on + strand, within AZOBR_RS00580 at 115.832 kb on + strand, within AZOBR_RS00580 at 115.833 kb on - strand, within AZOBR_RS00580 at 115.833 kb on - strand, within AZOBR_RS00580 at 116.049 kb on - strand, within AZOBR_RS00580 at 116.127 kb on - strand, within AZOBR_RS00580 at 116.127 kb on - strand, within AZOBR_RS00580 at 116.268 kb on + strand at 116.268 kb on + strand at 116.269 kb on - strand at 116.269 kb on - strand at 116.269 kb on - strand at 116.488 kb on + strand, within AZOBR_RS00585 at 116.488 kb on + strand, within AZOBR_RS00585 at 116.488 kb on + strand, within AZOBR_RS00585 at 116.489 kb on - strand, within AZOBR_RS00585 at 116.623 kb on + strand, within AZOBR_RS00585 at 116.624 kb on - strand, within AZOBR_RS00585 at 116.624 kb on - strand, within AZOBR_RS00585 at 116.752 kb on + strand, within AZOBR_RS00585 at 116.752 kb on + strand, within AZOBR_RS00585 at 116.753 kb on - strand, within AZOBR_RS00585 at 116.753 kb on - strand, within AZOBR_RS00585 at 116.771 kb on - strand, within AZOBR_RS00585 at 116.834 kb on - strand, within AZOBR_RS00585 at 117.133 kb on + strand at 117.133 kb on + strand at 117.133 kb on + strand at 117.134 kb on - strand at 117.134 kb on - strand at 117.157 kb on - strand at 117.650 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 115,353 - +0.4 115,583 + AZOBR_RS00580 0.33 -1.9 115,712 + AZOBR_RS00580 0.45 -0.9 115,712 + AZOBR_RS00580 0.45 +0.4 115,712 + AZOBR_RS00580 0.45 -0.3 115,712 + AZOBR_RS00580 0.45 +0.4 115,712 + AZOBR_RS00580 0.45 -0.5 115,713 - AZOBR_RS00580 0.45 -0.1 115,713 - AZOBR_RS00580 0.45 -0.5 115,713 - AZOBR_RS00580 0.45 +0.9 115,713 - AZOBR_RS00580 0.45 -0.5 115,713 - AZOBR_RS00580 0.45 -2.1 115,713 - AZOBR_RS00580 0.45 +0.7 115,713 - +1.3 115,832 + AZOBR_RS00580 0.57 +0.5 115,832 + AZOBR_RS00580 0.57 +0.6 115,833 - AZOBR_RS00580 0.57 -2.4 115,833 - AZOBR_RS00580 0.57 -2.2 116,049 - AZOBR_RS00580 0.79 +0.9 116,127 - AZOBR_RS00580 0.86 +0.1 116,127 - AZOBR_RS00580 0.86 +0.3 116,268 + +1.6 116,268 + +1.4 116,269 - +0.9 116,269 - -0.4 116,269 - +1.4 116,488 + AZOBR_RS00585 0.24 +2.3 116,488 + AZOBR_RS00585 0.24 +0.8 116,488 + AZOBR_RS00585 0.24 +0.0 116,489 - AZOBR_RS00585 0.24 -0.6 116,623 + AZOBR_RS00585 0.42 -0.7 116,624 - AZOBR_RS00585 0.42 +0.9 116,624 - AZOBR_RS00585 0.42 +1.1 116,752 + AZOBR_RS00585 0.60 +0.5 116,752 + AZOBR_RS00585 0.60 +0.9 116,753 - AZOBR_RS00585 0.60 -2.2 116,753 - AZOBR_RS00585 0.60 +0.1 116,771 - AZOBR_RS00585 0.62 +2.3 116,834 - AZOBR_RS00585 0.71 +1.0 117,133 + -1.5 117,133 + +0.7 117,133 + +0.4 117,134 - -0.0 117,134 - -3.6 117,157 - -0.7 117,650 - -2.1
Or see this region's nucleotide sequence