Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00200 and AZOBR_RS00205 are separated by 70 nucleotides AZOBR_RS00205 and AZOBR_RS00210 are separated by 346 nucleotides AZOBR_RS00210 and AZOBR_RS00215 are separated by 345 nucleotides
AZOBR_RS00200: AZOBR_RS00200 - hypothetical protein, at 32,645 to 34,279
_RS00200
AZOBR_RS00205: AZOBR_RS00205 - hypothetical protein, at 34,350 to 34,592
_RS00205
AZOBR_RS00210: AZOBR_RS00210 - hypothetical protein, at 34,939 to 35,442
_RS00210
AZOBR_RS00215: AZOBR_RS00215 - MFS transporter, at 35,788 to 37,098
_RS00215
Position (kb) 34
35
36 Strain fitness (log2 ratio) -2
-1
0
1
2 at 34.114 kb on + strand, within AZOBR_RS00200 at 34.114 kb on + strand, within AZOBR_RS00200 at 34.114 kb on + strand, within AZOBR_RS00200 at 34.133 kb on + strand at 34.133 kb on + strand at 34.134 kb on - strand at 34.184 kb on + strand at 34.184 kb on + strand at 34.185 kb on - strand at 34.185 kb on - strand at 34.930 kb on + strand at 34.930 kb on + strand at 34.931 kb on - strand at 34.931 kb on - strand at 35.074 kb on + strand, within AZOBR_RS00210 at 35.074 kb on + strand, within AZOBR_RS00210 at 35.137 kb on + strand, within AZOBR_RS00210 at 35.138 kb on - strand, within AZOBR_RS00210 at 35.138 kb on - strand, within AZOBR_RS00210 at 35.138 kb on - strand, within AZOBR_RS00210 at 35.272 kb on + strand, within AZOBR_RS00210 at 35.273 kb on - strand, within AZOBR_RS00210 at 35.273 kb on - strand, within AZOBR_RS00210 at 35.273 kb on - strand, within AZOBR_RS00210 at 35.707 kb on + strand at 35.707 kb on + strand at 35.708 kb on - strand at 35.708 kb on - strand at 35.843 kb on - strand at 35.863 kb on + strand at 35.900 kb on - strand at 36.178 kb on + strand, within AZOBR_RS00215 at 36.253 kb on + strand, within AZOBR_RS00215
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1 mM remove 34,114 + AZOBR_RS00200 0.90 +1.1 34,114 + AZOBR_RS00200 0.90 -1.2 34,114 + AZOBR_RS00200 0.90 +0.5 34,133 + -0.3 34,133 + -0.4 34,134 - -0.1 34,184 + -0.7 34,184 + -1.9 34,185 - -2.2 34,185 - +0.2 34,930 + -0.8 34,930 + -1.5 34,931 - +0.1 34,931 - -0.3 35,074 + AZOBR_RS00210 0.27 -0.3 35,074 + AZOBR_RS00210 0.27 +0.1 35,137 + AZOBR_RS00210 0.39 -1.5 35,138 - AZOBR_RS00210 0.39 -0.6 35,138 - AZOBR_RS00210 0.39 -0.0 35,138 - AZOBR_RS00210 0.39 +2.4 35,272 + AZOBR_RS00210 0.66 -0.8 35,273 - AZOBR_RS00210 0.66 +0.2 35,273 - AZOBR_RS00210 0.66 +0.2 35,273 - AZOBR_RS00210 0.66 +0.3 35,707 + +0.7 35,707 + -0.2 35,708 - -1.5 35,708 - -0.5 35,843 - -0.2 35,863 + +1.3 35,900 - +1.7 36,178 + AZOBR_RS00215 0.30 +1.8 36,253 + AZOBR_RS00215 0.35 -0.6
Or see this region's nucleotide sequence