Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS00090
Experiment: Chlorite 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1 mM |
---|---|---|---|---|---|
remove | |||||
7,233 | + | -2.1 | |||
7,235 | + | -0.5 | |||
7,310 | - | +0.2 | |||
7,310 | - | +0.5 | |||
7,392 | + | -0.3 | |||
7,394 | + | -0.6 | |||
7,395 | - | -0.5 | |||
7,395 | - | -0.9 | |||
7,395 | - | +2.7 | |||
7,395 | - | -0.4 | |||
7,403 | + | -0.2 | |||
7,404 | - | -0.7 | |||
7,404 | - | +0.2 | |||
7,710 | + | AZOBR_RS00090 | 0.43 | -2.5 | |
7,710 | + | AZOBR_RS00090 | 0.43 | -1.0 | |
7,710 | + | AZOBR_RS00090 | 0.43 | +0.7 | |
8,013 | + | AZOBR_RS00090 | 0.82 | -0.2 | |
8,013 | + | AZOBR_RS00090 | 0.82 | -0.2 | |
8,013 | + | AZOBR_RS00090 | 0.82 | +0.5 | |
8,014 | - | AZOBR_RS00090 | 0.82 | -1.9 | |
8,014 | - | AZOBR_RS00090 | 0.82 | -0.7 | |
8,258 | - | -2.0 | |||
8,377 | - | -0.8 | |||
8,377 | - | -0.1 | |||
8,485 | - | AZOBR_RS00095 | 0.16 | -3.1 | |
8,544 | + | AZOBR_RS00095 | 0.21 | -1.8 | |
8,544 | + | AZOBR_RS00095 | 0.21 | +0.4 | |
8,544 | + | AZOBR_RS00095 | 0.21 | -0.1 | |
8,703 | + | AZOBR_RS00095 | 0.34 | -0.5 | |
8,703 | + | AZOBR_RS00095 | 0.34 | +0.3 | |
8,704 | - | AZOBR_RS00095 | 0.34 | +0.1 | |
8,907 | + | AZOBR_RS00095 | 0.51 | -2.4 |
Or see this region's nucleotide sequence