Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18450 and AO356_18455 are separated by 2 nucleotides AO356_18455 and AO356_18460 are separated by 28 nucleotides
AO356_18450: AO356_18450 - outer membrane component of uptake system, probably for ferrous iron (from data) , at 4,153,636 to 4,154,733
_18450
AO356_18455: AO356_18455 - imelysin, at 4,154,736 to 4,155,800
_18455
AO356_18460: AO356_18460 - thiol oxidoreductase, at 4,155,829 to 4,157,256
_18460
Position (kb)
4154
4155
4156 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4153.910 kb on + strand, within AO356_18450 at 4153.910 kb on + strand, within AO356_18450 at 4153.910 kb on + strand, within AO356_18450 at 4154.269 kb on + strand, within AO356_18450 at 4154.269 kb on + strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.270 kb on - strand, within AO356_18450 at 4154.309 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.360 kb on + strand, within AO356_18450 at 4154.361 kb on - strand, within AO356_18450 at 4154.399 kb on + strand, within AO356_18450 at 4154.399 kb on + strand, within AO356_18450 at 4154.400 kb on - strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.465 kb on + strand, within AO356_18450 at 4154.466 kb on - strand, within AO356_18450 at 4154.597 kb on + strand, within AO356_18450 at 4154.598 kb on - strand, within AO356_18450 at 4154.830 kb on + strand at 4154.830 kb on + strand at 4154.831 kb on - strand at 4154.923 kb on + strand, within AO356_18455 at 4155.090 kb on + strand, within AO356_18455 at 4155.090 kb on + strand, within AO356_18455 at 4155.090 kb on + strand, within AO356_18455 at 4155.091 kb on - strand, within AO356_18455 at 4155.319 kb on + strand, within AO356_18455 at 4155.320 kb on - strand, within AO356_18455 at 4155.320 kb on - strand, within AO356_18455 at 4155.320 kb on - strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.373 kb on + strand, within AO356_18455 at 4155.374 kb on - strand, within AO356_18455 at 4155.396 kb on + strand, within AO356_18455 at 4155.679 kb on + strand, within AO356_18455 at 4155.679 kb on + strand, within AO356_18455 at 4155.680 kb on - strand, within AO356_18455 at 4155.680 kb on - strand, within AO356_18455 at 4155.830 kb on + strand at 4155.831 kb on - strand at 4155.884 kb on - strand at 4156.106 kb on + strand, within AO356_18460 at 4156.163 kb on + strand, within AO356_18460 at 4156.163 kb on + strand, within AO356_18460 at 4156.164 kb on - strand, within AO356_18460 at 4156.164 kb on - strand, within AO356_18460 at 4156.274 kb on + strand, within AO356_18460 at 4156.275 kb on - strand, within AO356_18460 at 4156.483 kb on + strand, within AO356_18460 at 4156.483 kb on + strand, within AO356_18460 at 4156.484 kb on - strand, within AO356_18460 at 4156.484 kb on - strand, within AO356_18460 at 4156.668 kb on - strand, within AO356_18460 at 4156.748 kb on + strand, within AO356_18460 at 4156.748 kb on + strand, within AO356_18460 at 4156.749 kb on - strand, within AO356_18460 at 4156.749 kb on - strand, within AO356_18460 at 4156.749 kb on - strand, within AO356_18460 at 4156.764 kb on + strand, within AO356_18460 at 4156.765 kb on - strand, within AO356_18460
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 4,153,910 + AO356_18450 0.25 +0.3 4,153,910 + AO356_18450 0.25 +0.3 4,153,910 + AO356_18450 0.25 -0.4 4,154,269 + AO356_18450 0.58 +0.5 4,154,269 + AO356_18450 0.58 -0.7 4,154,270 - AO356_18450 0.58 +0.1 4,154,270 - AO356_18450 0.58 +0.1 4,154,270 - AO356_18450 0.58 -0.8 4,154,270 - AO356_18450 0.58 +0.2 4,154,270 - AO356_18450 0.58 +0.7 4,154,309 + AO356_18450 0.61 +0.7 4,154,360 + AO356_18450 0.66 -0.2 4,154,360 + AO356_18450 0.66 +0.2 4,154,360 + AO356_18450 0.66 +0.6 4,154,360 + AO356_18450 0.66 +0.3 4,154,361 - AO356_18450 0.66 -0.1 4,154,399 + AO356_18450 0.69 -0.0 4,154,399 + AO356_18450 0.69 +0.0 4,154,400 - AO356_18450 0.70 +0.8 4,154,465 + AO356_18450 0.76 -0.8 4,154,465 + AO356_18450 0.76 -0.6 4,154,465 + AO356_18450 0.76 -0.0 4,154,465 + AO356_18450 0.76 +1.1 4,154,466 - AO356_18450 0.76 -0.3 4,154,597 + AO356_18450 0.88 -0.2 4,154,598 - AO356_18450 0.88 +1.0 4,154,830 + +1.0 4,154,830 + -0.3 4,154,831 - -0.0 4,154,923 + AO356_18455 0.18 -0.2 4,155,090 + AO356_18455 0.33 -0.4 4,155,090 + AO356_18455 0.33 +0.4 4,155,090 + AO356_18455 0.33 -1.5 4,155,091 - AO356_18455 0.33 +0.3 4,155,319 + AO356_18455 0.55 -0.2 4,155,320 - AO356_18455 0.55 +0.1 4,155,320 - AO356_18455 0.55 -0.1 4,155,320 - AO356_18455 0.55 -0.1 4,155,373 + AO356_18455 0.60 +2.1 4,155,373 + AO356_18455 0.60 +0.2 4,155,373 + AO356_18455 0.60 +1.6 4,155,373 + AO356_18455 0.60 +0.3 4,155,373 + AO356_18455 0.60 -0.0 4,155,373 + AO356_18455 0.60 +0.3 4,155,374 - AO356_18455 0.60 -0.4 4,155,396 + AO356_18455 0.62 +0.3 4,155,679 + AO356_18455 0.89 +1.7 4,155,679 + AO356_18455 0.89 +3.0 4,155,680 - AO356_18455 0.89 +0.2 4,155,680 - AO356_18455 0.89 -0.4 4,155,830 + -0.3 4,155,831 - +0.3 4,155,884 - +0.7 4,156,106 + AO356_18460 0.19 +0.7 4,156,163 + AO356_18460 0.23 -0.6 4,156,163 + AO356_18460 0.23 +1.0 4,156,164 - AO356_18460 0.23 +0.9 4,156,164 - AO356_18460 0.23 +0.1 4,156,274 + AO356_18460 0.31 +0.9 4,156,275 - AO356_18460 0.31 -0.4 4,156,483 + AO356_18460 0.46 +0.7 4,156,483 + AO356_18460 0.46 -0.6 4,156,484 - AO356_18460 0.46 +0.5 4,156,484 - AO356_18460 0.46 -0.2 4,156,668 - AO356_18460 0.59 +0.1 4,156,748 + AO356_18460 0.64 -0.7 4,156,748 + AO356_18460 0.64 +0.1 4,156,749 - AO356_18460 0.64 +0.1 4,156,749 - AO356_18460 0.64 -0.6 4,156,749 - AO356_18460 0.64 +0.2 4,156,764 + AO356_18460 0.65 +0.6 4,156,765 - AO356_18460 0.66 +0.6
Or see this region's nucleotide sequence