Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16450

Experiment: Benzethonium chloride 0.025 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_16445 and AO356_16450 are separated by 281 nucleotidesAO356_16450 and AO356_16455 are separated by 22 nucleotidesAO356_16455 and AO356_16460 are separated by 166 nucleotides AO356_16445: AO356_16445 - MFS transporter, at 3,717,551 to 3,718,759 _16445 AO356_16450: AO356_16450 - GTP-binding protein, at 3,719,041 to 3,720,141 _16450 AO356_16455: AO356_16455 - peptidyl-tRNA hydrolase, at 3,720,164 to 3,720,748 _16455 AO356_16460: AO356_16460 - 50S ribosomal protein L25, at 3,720,915 to 3,721,517 _16460 Position (kb) 3719 3720 3721Strain fitness (log2 ratio) -2 -1 0 1 2at 3718.115 kb on - strand, within AO356_16445at 3718.115 kb on - strand, within AO356_16445at 3718.147 kb on + strand, within AO356_16445at 3718.147 kb on + strand, within AO356_16445at 3718.147 kb on + strand, within AO356_16445at 3718.148 kb on - strand, within AO356_16445at 3718.217 kb on + strand, within AO356_16445at 3718.218 kb on - strand, within AO356_16445at 3718.218 kb on - strand, within AO356_16445at 3718.316 kb on + strand, within AO356_16445at 3718.317 kb on - strand, within AO356_16445at 3718.317 kb on - strand, within AO356_16445at 3718.317 kb on - strand, within AO356_16445at 3718.317 kb on - strand, within AO356_16445at 3718.318 kb on + strand, within AO356_16445at 3718.319 kb on - strand, within AO356_16445at 3718.319 kb on - strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.346 kb on + strand, within AO356_16445at 3718.347 kb on - strand, within AO356_16445at 3718.347 kb on - strand, within AO356_16445at 3718.347 kb on - strand, within AO356_16445at 3718.373 kb on + strand, within AO356_16445at 3718.389 kb on - strand, within AO356_16445at 3718.389 kb on - strand, within AO356_16445at 3718.462 kb on + strand, within AO356_16445at 3718.462 kb on + strand, within AO356_16445at 3718.462 kb on + strand, within AO356_16445at 3718.462 kb on + strand, within AO356_16445at 3718.462 kb on + strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.463 kb on - strand, within AO356_16445at 3718.464 kb on + strand, within AO356_16445at 3718.464 kb on + strand, within AO356_16445at 3718.464 kb on + strand, within AO356_16445at 3718.464 kb on + strand, within AO356_16445at 3718.464 kb on + strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.465 kb on - strand, within AO356_16445at 3718.492 kb on + strand, within AO356_16445at 3718.492 kb on + strand, within AO356_16445at 3718.493 kb on - strand, within AO356_16445at 3718.493 kb on - strand, within AO356_16445at 3718.493 kb on - strand, within AO356_16445at 3718.493 kb on - strand, within AO356_16445at 3718.559 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.591 kb on + strand, within AO356_16445at 3718.592 kb on - strand, within AO356_16445at 3718.592 kb on - strand, within AO356_16445at 3718.592 kb on - strand, within AO356_16445at 3718.592 kb on - strand, within AO356_16445at 3718.592 kb on - strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.593 kb on + strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strandat 3718.594 kb on - strand, within AO356_16445at 3718.594 kb on - strand, within AO356_16445at 3718.597 kb on + strand, within AO356_16445at 3718.597 kb on + strand, within AO356_16445at 3718.598 kb on - strand, within AO356_16445at 3718.598 kb on - strand, within AO356_16445at 3718.624 kb on - strand, within AO356_16445at 3718.702 kb on + strandat 3718.702 kb on + strandat 3718.703 kb on - strandat 3718.703 kb on - strandat 3718.703 kb on - strandat 3718.703 kb on - strandat 3718.771 kb on + strandat 3718.772 kb on - strandat 3718.792 kb on - strandat 3718.878 kb on - strandat 3718.878 kb on - strandat 3718.878 kb on - strandat 3718.894 kb on + strandat 3718.895 kb on - strandat 3719.049 kb on + strandat 3719.049 kb on + strandat 3719.087 kb on + strandat 3719.088 kb on - strandat 3719.088 kb on - strandat 3719.088 kb on - strandat 3719.088 kb on - strandat 3719.144 kb on + strandat 3719.144 kb on + strandat 3719.145 kb on - strandat 3719.288 kb on + strand, within AO356_16450at 3719.289 kb on - strand, within AO356_16450at 3719.289 kb on - strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.525 kb on + strand, within AO356_16450at 3719.526 kb on - strand, within AO356_16450at 3719.562 kb on + strand, within AO356_16450at 3720.108 kb on + strandat 3720.158 kb on + strandat 3720.158 kb on + strandat 3720.158 kb on + strandat 3720.159 kb on - strandat 3720.737 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM
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3,718,115 - AO356_16445 0.47 +0.6
3,718,115 - AO356_16445 0.47 +0.5
3,718,147 + AO356_16445 0.49 +0.1
3,718,147 + AO356_16445 0.49 -0.1
3,718,147 + AO356_16445 0.49 -0.5
3,718,148 - AO356_16445 0.49 -0.4
3,718,217 + AO356_16445 0.55 -0.6
3,718,218 - AO356_16445 0.55 +0.4
3,718,218 - AO356_16445 0.55 -0.8
3,718,316 + AO356_16445 0.63 -1.1
3,718,317 - AO356_16445 0.63 -1.7
3,718,317 - AO356_16445 0.63 -0.1
3,718,317 - AO356_16445 0.63 -0.1
3,718,317 - AO356_16445 0.63 +0.2
3,718,318 + AO356_16445 0.63 -0.0
3,718,319 - AO356_16445 0.64 -0.0
3,718,319 - AO356_16445 0.64 -0.2
3,718,346 + AO356_16445 0.66 +0.6
3,718,346 + AO356_16445 0.66 -0.2
3,718,346 + AO356_16445 0.66 -0.5
3,718,346 + AO356_16445 0.66 +0.3
3,718,346 + AO356_16445 0.66 -0.0
3,718,346 + AO356_16445 0.66 +1.0
3,718,346 + AO356_16445 0.66 -0.2
3,718,346 + AO356_16445 0.66 -0.5
3,718,347 - AO356_16445 0.66 -0.3
3,718,347 - AO356_16445 0.66 +0.3
3,718,347 - AO356_16445 0.66 -0.0
3,718,373 + AO356_16445 0.68 -0.3
3,718,389 - AO356_16445 0.69 -0.2
3,718,389 - AO356_16445 0.69 -1.1
3,718,462 + AO356_16445 0.75 -0.5
3,718,462 + AO356_16445 0.75 -1.7
3,718,462 + AO356_16445 0.75 +0.3
3,718,462 + AO356_16445 0.75 +0.1
3,718,462 + AO356_16445 0.75 +0.4
3,718,463 - AO356_16445 0.75 +0.9
3,718,463 - AO356_16445 0.75 -0.6
3,718,463 - AO356_16445 0.75 -0.2
3,718,463 - AO356_16445 0.75 +0.2
3,718,463 - AO356_16445 0.75 -0.2
3,718,463 - AO356_16445 0.75 -0.3
3,718,463 - AO356_16445 0.75 +0.9
3,718,464 + AO356_16445 0.76 -0.4
3,718,464 + AO356_16445 0.76 -0.8
3,718,464 + AO356_16445 0.76 +0.2
3,718,464 + AO356_16445 0.76 -0.7
3,718,464 + AO356_16445 0.76 +0.5
3,718,465 - AO356_16445 0.76 +1.1
3,718,465 - AO356_16445 0.76 +0.4
3,718,465 - AO356_16445 0.76 +0.0
3,718,465 - AO356_16445 0.76 +0.7
3,718,465 - AO356_16445 0.76 -0.3
3,718,465 - AO356_16445 0.76 +0.1
3,718,465 - AO356_16445 0.76 +0.6
3,718,492 + AO356_16445 0.78 +0.2
3,718,492 + AO356_16445 0.78 -0.5
3,718,493 - AO356_16445 0.78 +0.1
3,718,493 - AO356_16445 0.78 -0.4
3,718,493 - AO356_16445 0.78 -0.5
3,718,493 - AO356_16445 0.78 -1.3
3,718,559 + AO356_16445 0.83 +0.6
3,718,591 + AO356_16445 0.86 -0.4
3,718,591 + AO356_16445 0.86 -0.3
3,718,591 + AO356_16445 0.86 +0.3
3,718,591 + AO356_16445 0.86 -0.8
3,718,591 + AO356_16445 0.86 +0.3
3,718,591 + AO356_16445 0.86 -1.2
3,718,591 + AO356_16445 0.86 +0.2
3,718,591 + AO356_16445 0.86 +0.1
3,718,592 - AO356_16445 0.86 -0.0
3,718,592 - AO356_16445 0.86 +1.8
3,718,592 - AO356_16445 0.86 +0.2
3,718,592 - AO356_16445 0.86 -0.7
3,718,592 - AO356_16445 0.86 +0.9
3,718,593 + AO356_16445 0.86 +0.6
3,718,593 + AO356_16445 0.86 +0.6
3,718,593 + AO356_16445 0.86 -0.0
3,718,593 + AO356_16445 0.86 +0.2
3,718,593 + AO356_16445 0.86 -0.3
3,718,593 + AO356_16445 0.86 +0.4
3,718,593 + AO356_16445 0.86 -0.6
3,718,593 + AO356_16445 0.86 +0.0
3,718,593 + AO356_16445 0.86 -0.3
3,718,593 + AO356_16445 0.86 -0.6
3,718,593 + AO356_16445 0.86 +0.6
3,718,594 - AO356_16445 0.86 -0.0
3,718,594 - AO356_16445 0.86 +1.9
3,718,594 - AO356_16445 0.86 -0.2
3,718,594 - AO356_16445 0.86 +0.5
3,718,594 - AO356_16445 0.86 -2.1
3,718,594 - AO356_16445 0.86 -2.2
3,718,594 - AO356_16445 0.86 +0.1
3,718,594 - AO356_16445 0.86 -0.2
3,718,594 - AO356_16445 0.86 +0.2
3,718,594 - AO356_16445 0.86 +0.3
3,718,594 - AO356_16445 0.86 -0.1
3,718,594 - AO356_16445 0.86 -0.5
3,718,594 - +0.2
3,718,594 - AO356_16445 0.86 +0.3
3,718,594 - AO356_16445 0.86 +0.2
3,718,597 + AO356_16445 0.87 +1.4
3,718,597 + AO356_16445 0.87 -0.0
3,718,598 - AO356_16445 0.87 +1.1
3,718,598 - AO356_16445 0.87 -0.4
3,718,624 - AO356_16445 0.89 -0.2
3,718,702 + -0.1
3,718,702 + +0.5
3,718,703 - +0.6
3,718,703 - +0.7
3,718,703 - -1.3
3,718,703 - +0.0
3,718,771 + +1.5
3,718,772 - +0.3
3,718,792 - +0.3
3,718,878 - -0.5
3,718,878 - -0.7
3,718,878 - -1.0
3,718,894 + -0.6
3,718,895 - +0.7
3,719,049 + +0.9
3,719,049 + +0.4
3,719,087 + +0.2
3,719,088 - -0.1
3,719,088 - -0.8
3,719,088 - -0.8
3,719,088 - -1.4
3,719,144 + -0.2
3,719,144 + -0.7
3,719,145 - -0.7
3,719,288 + AO356_16450 0.22 +0.4
3,719,289 - AO356_16450 0.23 +0.6
3,719,289 - AO356_16450 0.23 -0.8
3,719,525 + AO356_16450 0.44 +1.5
3,719,525 + AO356_16450 0.44 -1.0
3,719,525 + AO356_16450 0.44 -0.9
3,719,525 + AO356_16450 0.44 -2.4
3,719,525 + AO356_16450 0.44 +0.1
3,719,525 + AO356_16450 0.44 +0.1
3,719,525 + AO356_16450 0.44 -1.6
3,719,526 - AO356_16450 0.44 -1.4
3,719,562 + AO356_16450 0.47 -0.9
3,720,108 + -1.6
3,720,158 + +0.2
3,720,158 + +0.5
3,720,158 + +0.9
3,720,159 - +0.3
3,720,737 - +0.3

Or see this region's nucleotide sequence