Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06795 and AO356_06800 overlap by 1 nucleotides AO356_06800 and AO356_06805 are separated by 400 nucleotides
AO356_06795: AO356_06795 - histidine kinase, at 1,500,043 to 1,502,430
_06795
AO356_06800: AO356_06800 - AraC family transcriptional regulator, at 1,502,430 to 1,503,230
_06800
AO356_06805: AO356_06805 - hypothetical protein, at 1,503,631 to 1,505,139
_06805
Position (kb)
1502
1503
1504 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1501.458 kb on - strand, within AO356_06795 at 1501.458 kb on - strand, within AO356_06795 at 1501.458 kb on - strand, within AO356_06795 at 1501.526 kb on - strand, within AO356_06795 at 1501.564 kb on + strand, within AO356_06795 at 1501.564 kb on + strand, within AO356_06795 at 1501.610 kb on + strand, within AO356_06795 at 1501.610 kb on + strand, within AO356_06795 at 1501.611 kb on - strand, within AO356_06795 at 1501.648 kb on + strand, within AO356_06795 at 1501.649 kb on - strand, within AO356_06795 at 1501.649 kb on - strand, within AO356_06795 at 1501.664 kb on + strand, within AO356_06795 at 1501.664 kb on + strand, within AO356_06795 at 1501.664 kb on + strand, within AO356_06795 at 1501.742 kb on + strand, within AO356_06795 at 1501.743 kb on - strand, within AO356_06795 at 1501.743 kb on - strand, within AO356_06795 at 1501.743 kb on - strand, within AO356_06795 at 1501.751 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.781 kb on + strand, within AO356_06795 at 1501.782 kb on - strand, within AO356_06795 at 1501.782 kb on - strand, within AO356_06795 at 1501.898 kb on + strand, within AO356_06795 at 1501.899 kb on - strand, within AO356_06795 at 1501.899 kb on - strand, within AO356_06795 at 1501.899 kb on - strand, within AO356_06795 at 1502.070 kb on - strand, within AO356_06795 at 1502.105 kb on + strand, within AO356_06795 at 1502.213 kb on + strand at 1502.213 kb on + strand at 1502.213 kb on + strand at 1502.214 kb on - strand at 1502.214 kb on - strand at 1502.410 kb on + strand at 1502.411 kb on - strand at 1502.411 kb on - strand at 1502.411 kb on - strand at 1502.419 kb on + strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.420 kb on - strand at 1502.633 kb on - strand, within AO356_06800 at 1502.633 kb on - strand, within AO356_06800 at 1502.862 kb on - strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.902 kb on + strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1502.903 kb on - strand, within AO356_06800 at 1503.165 kb on - strand at 1503.195 kb on - strand at 1503.269 kb on - strand at 1503.278 kb on + strand at 1503.279 kb on - strand at 1503.297 kb on - strand at 1503.316 kb on + strand at 1503.316 kb on + strand at 1503.316 kb on + strand at 1503.352 kb on + strand at 1503.352 kb on + strand at 1503.354 kb on + strand at 1503.354 kb on + strand at 1503.355 kb on - strand at 1503.355 kb on - strand at 1503.355 kb on - strand at 1503.398 kb on + strand at 1503.399 kb on - strand at 1503.399 kb on - strand at 1503.399 kb on - strand at 1503.432 kb on - strand at 1503.433 kb on + strand at 1503.434 kb on - strand at 1503.518 kb on - strand at 1503.660 kb on + strand at 1503.660 kb on + strand at 1503.661 kb on - strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.709 kb on + strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.710 kb on - strand at 1503.712 kb on + strand at 1503.713 kb on - strand at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.060 kb on + strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.061 kb on - strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.072 kb on + strand, within AO356_06805 at 1504.073 kb on - strand, within AO356_06805 at 1504.073 kb on - strand, within AO356_06805 at 1504.145 kb on - strand, within AO356_06805
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 1,501,458 - AO356_06795 0.59 -0.3 1,501,458 - AO356_06795 0.59 +0.0 1,501,458 - AO356_06795 0.59 +1.4 1,501,526 - AO356_06795 0.62 +0.9 1,501,564 + AO356_06795 0.64 -0.7 1,501,564 + AO356_06795 0.64 +0.5 1,501,610 + AO356_06795 0.66 +0.3 1,501,610 + AO356_06795 0.66 -0.4 1,501,611 - AO356_06795 0.66 -0.6 1,501,648 + AO356_06795 0.67 -0.1 1,501,649 - AO356_06795 0.67 -0.2 1,501,649 - AO356_06795 0.67 +0.8 1,501,664 + AO356_06795 0.68 +0.2 1,501,664 + AO356_06795 0.68 +0.4 1,501,664 + AO356_06795 0.68 +0.7 1,501,742 + AO356_06795 0.71 +2.0 1,501,743 - AO356_06795 0.71 +0.6 1,501,743 - AO356_06795 0.71 -1.5 1,501,743 - AO356_06795 0.71 -1.2 1,501,751 + AO356_06795 0.72 -0.5 1,501,781 + AO356_06795 0.73 +0.2 1,501,781 + AO356_06795 0.73 -0.9 1,501,781 + AO356_06795 0.73 +0.8 1,501,781 + AO356_06795 0.73 -1.5 1,501,781 + AO356_06795 0.73 -0.2 1,501,781 + AO356_06795 0.73 +0.8 1,501,782 - AO356_06795 0.73 +0.9 1,501,782 - AO356_06795 0.73 +0.0 1,501,898 + AO356_06795 0.78 +0.1 1,501,899 - AO356_06795 0.78 +0.4 1,501,899 - AO356_06795 0.78 -0.7 1,501,899 - AO356_06795 0.78 -0.6 1,502,070 - AO356_06795 0.85 +0.3 1,502,105 + AO356_06795 0.86 +0.4 1,502,213 + +0.1 1,502,213 + +0.3 1,502,213 + +1.1 1,502,214 - -0.2 1,502,214 - -0.8 1,502,410 + +0.8 1,502,411 - -0.0 1,502,411 - -0.4 1,502,411 - +0.0 1,502,419 + +0.5 1,502,420 - -0.4 1,502,420 - -0.5 1,502,420 - -0.3 1,502,420 - -0.1 1,502,420 - -0.7 1,502,633 - AO356_06800 0.25 +0.5 1,502,633 - AO356_06800 0.25 +0.1 1,502,862 - AO356_06800 0.54 +0.3 1,502,902 + AO356_06800 0.59 -0.1 1,502,902 + AO356_06800 0.59 +0.6 1,502,902 + AO356_06800 0.59 -0.0 1,502,902 + AO356_06800 0.59 -1.3 1,502,903 - AO356_06800 0.59 +0.6 1,502,903 - AO356_06800 0.59 +0.1 1,502,903 - AO356_06800 0.59 +1.8 1,502,903 - AO356_06800 0.59 +0.7 1,502,903 - AO356_06800 0.59 -1.4 1,503,165 - -0.4 1,503,195 - +0.7 1,503,269 - -0.6 1,503,278 + +1.7 1,503,279 - -0.0 1,503,297 - -0.2 1,503,316 + +0.7 1,503,316 + +0.7 1,503,316 + -0.3 1,503,352 + +0.6 1,503,352 + +0.3 1,503,354 + +2.2 1,503,354 + +0.1 1,503,355 - +0.8 1,503,355 - -0.5 1,503,355 - -0.5 1,503,398 + +0.5 1,503,399 - -0.7 1,503,399 - +1.2 1,503,399 - +0.2 1,503,432 - -0.4 1,503,433 + +0.3 1,503,434 - -0.1 1,503,518 - -2.2 1,503,660 + +0.2 1,503,660 + -0.1 1,503,661 - -0.8 1,503,709 + +1.0 1,503,709 + +0.1 1,503,709 + -0.3 1,503,709 + -0.2 1,503,709 + -1.0 1,503,709 + -0.0 1,503,710 - -0.6 1,503,710 - +0.2 1,503,710 - -0.4 1,503,710 - +1.0 1,503,710 - -0.6 1,503,710 - -0.6 1,503,712 + -0.9 1,503,713 - -0.2 1,504,060 + AO356_06805 0.28 +2.2 1,504,060 + AO356_06805 0.28 -0.2 1,504,060 + AO356_06805 0.28 -0.4 1,504,060 + AO356_06805 0.28 -0.1 1,504,060 + AO356_06805 0.28 -0.7 1,504,060 + AO356_06805 0.28 +0.1 1,504,060 + AO356_06805 0.28 -0.0 1,504,060 + AO356_06805 0.28 -0.2 1,504,060 + AO356_06805 0.28 +0.0 1,504,061 - AO356_06805 0.28 -0.8 1,504,061 - AO356_06805 0.28 +0.4 1,504,061 - AO356_06805 0.28 +0.6 1,504,061 - AO356_06805 0.28 -0.4 1,504,061 - AO356_06805 0.28 -0.6 1,504,072 + AO356_06805 0.29 -1.1 1,504,072 + AO356_06805 0.29 -0.8 1,504,072 + AO356_06805 0.29 +0.1 1,504,073 - AO356_06805 0.29 +0.6 1,504,073 - AO356_06805 0.29 -0.1 1,504,145 - AO356_06805 0.34 +0.3
Or see this region's nucleotide sequence