Experiment: Benzethonium chloride 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05845 and AO356_05850 are separated by 3 nucleotides AO356_05850 and AO356_05855 are separated by 36 nucleotides AO356_05855 and AO356_05860 are separated by 50 nucleotides
AO356_05845: AO356_05845 - baseplate assembly protein, at 1,295,772 to 1,296,383
_05845
AO356_05850: AO356_05850 - hypothetical protein, at 1,296,387 to 1,296,899
_05850
AO356_05855: AO356_05855 - pyocin R2, holin, at 1,296,936 to 1,297,286
_05855
AO356_05860: AO356_05860 - hypothetical protein, at 1,297,337 to 1,297,981
_05860
Position (kb)
1296
1297
1298 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1296.127 kb on - strand, within AO356_05845 at 1296.406 kb on + strand at 1296.406 kb on + strand at 1296.406 kb on + strand at 1296.407 kb on - strand at 1296.407 kb on - strand at 1296.407 kb on - strand at 1296.407 kb on - strand at 1296.497 kb on - strand, within AO356_05850 at 1296.533 kb on - strand, within AO356_05850 at 1296.832 kb on + strand, within AO356_05850 at 1296.832 kb on + strand, within AO356_05850 at 1296.833 kb on - strand, within AO356_05850 at 1296.833 kb on - strand, within AO356_05850 at 1296.916 kb on + strand at 1296.916 kb on + strand at 1296.978 kb on + strand, within AO356_05855 at 1297.009 kb on + strand, within AO356_05855 at 1297.009 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.093 kb on + strand, within AO356_05855 at 1297.094 kb on - strand, within AO356_05855 at 1297.094 kb on - strand, within AO356_05855 at 1297.305 kb on + strand at 1297.306 kb on - strand at 1297.319 kb on + strand at 1297.407 kb on + strand, within AO356_05860 at 1297.407 kb on + strand, within AO356_05860 at 1297.426 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.447 kb on + strand, within AO356_05860 at 1297.448 kb on - strand, within AO356_05860 at 1297.448 kb on - strand, within AO356_05860 at 1297.448 kb on - strand, within AO356_05860 at 1297.454 kb on - strand, within AO356_05860 at 1297.454 kb on - strand, within AO356_05860 at 1297.540 kb on + strand, within AO356_05860 at 1297.540 kb on + strand, within AO356_05860 at 1297.541 kb on - strand, within AO356_05860 at 1297.541 kb on - strand, within AO356_05860 at 1297.565 kb on + strand, within AO356_05860 at 1297.566 kb on - strand, within AO356_05860 at 1297.566 kb on - strand, within AO356_05860 at 1297.566 kb on - strand, within AO356_05860 at 1297.638 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.792 kb on - strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.872 kb on + strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.873 kb on - strand, within AO356_05860 at 1297.929 kb on - strand at 1297.973 kb on + strand at 1297.988 kb on + strand at 1298.011 kb on - strand at 1298.026 kb on + strand at 1298.026 kb on + strand at 1298.026 kb on + strand at 1298.026 kb on + strand at 1298.273 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.025 mM remove 1,296,127 - AO356_05845 0.58 -0.5 1,296,406 + -0.6 1,296,406 + +0.8 1,296,406 + +0.0 1,296,407 - -1.0 1,296,407 - -0.1 1,296,407 - +0.6 1,296,407 - +1.4 1,296,497 - AO356_05850 0.21 -0.2 1,296,533 - AO356_05850 0.28 +0.8 1,296,832 + AO356_05850 0.87 +1.3 1,296,832 + AO356_05850 0.87 -0.6 1,296,833 - AO356_05850 0.87 +1.8 1,296,833 - AO356_05850 0.87 +1.2 1,296,916 + +0.8 1,296,916 + -0.4 1,296,978 + AO356_05855 0.12 +0.3 1,297,009 + AO356_05855 0.21 +0.1 1,297,009 + AO356_05855 0.21 +0.5 1,297,093 + AO356_05855 0.45 +0.2 1,297,093 + AO356_05855 0.45 +0.6 1,297,093 + AO356_05855 0.45 -2.9 1,297,093 + AO356_05855 0.45 -0.1 1,297,094 - AO356_05855 0.45 -0.6 1,297,094 - AO356_05855 0.45 -0.5 1,297,305 + -0.3 1,297,306 - +1.5 1,297,319 + +0.6 1,297,407 + AO356_05860 0.11 -0.3 1,297,407 + AO356_05860 0.11 -0.5 1,297,426 + AO356_05860 0.14 -1.2 1,297,447 + AO356_05860 0.17 -1.2 1,297,447 + AO356_05860 0.17 +0.8 1,297,447 + AO356_05860 0.17 -0.8 1,297,447 + AO356_05860 0.17 -0.2 1,297,448 - AO356_05860 0.17 +1.4 1,297,448 - AO356_05860 0.17 -0.6 1,297,448 - AO356_05860 0.17 +1.4 1,297,454 - AO356_05860 0.18 -0.6 1,297,454 - AO356_05860 0.18 -0.5 1,297,540 + AO356_05860 0.31 -0.3 1,297,540 + AO356_05860 0.31 -0.2 1,297,541 - AO356_05860 0.32 +0.9 1,297,541 - AO356_05860 0.32 -0.6 1,297,565 + AO356_05860 0.35 -2.3 1,297,566 - AO356_05860 0.36 -0.5 1,297,566 - AO356_05860 0.36 -0.5 1,297,566 - AO356_05860 0.36 -0.4 1,297,638 - AO356_05860 0.47 -0.3 1,297,792 - AO356_05860 0.71 -0.1 1,297,792 - AO356_05860 0.71 +0.3 1,297,792 - AO356_05860 0.71 -0.7 1,297,792 - AO356_05860 0.71 -0.5 1,297,872 + AO356_05860 0.83 +0.7 1,297,872 + AO356_05860 0.83 -0.4 1,297,872 + AO356_05860 0.83 +0.8 1,297,872 + AO356_05860 0.83 +0.4 1,297,872 + AO356_05860 0.83 -0.4 1,297,873 - AO356_05860 0.83 +0.5 1,297,873 - AO356_05860 0.83 +0.6 1,297,873 - AO356_05860 0.83 +0.4 1,297,873 - AO356_05860 0.83 +0.7 1,297,929 - +0.2 1,297,973 + -2.3 1,297,988 + -0.7 1,298,011 - -0.4 1,298,026 + +0.4 1,298,026 + +0.9 1,298,026 + +0.4 1,298,026 + -0.4 1,298,273 + -0.2
Or see this region's nucleotide sequence