Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3145
Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,966,773 | + | DvMF_3144 | 0.65 | -1.3 | |
3,966,871 | - | DvMF_3144 | 0.71 | +0.1 | |
3,966,887 | - | DvMF_3144 | 0.72 | -1.3 | |
3,967,074 | - | DvMF_3144 | 0.83 | -0.9 | |
3,967,076 | - | DvMF_3144 | 0.83 | -0.2 | |
3,967,093 | - | DvMF_3144 | 0.84 | +0.7 | |
3,967,137 | + | DvMF_3144 | 0.87 | -1.3 | |
3,967,268 | - | -0.8 | |||
3,968,018 | + | DvMF_3145 | 0.25 | -0.8 | |
3,968,172 | + | DvMF_3145 | 0.37 | -1.3 | |
3,968,172 | + | DvMF_3145 | 0.37 | -1.1 | |
3,968,218 | + | DvMF_3145 | 0.40 | -0.7 | |
3,968,248 | + | DvMF_3145 | 0.42 | -1.5 | |
3,968,268 | - | DvMF_3145 | 0.44 | -1.1 | |
3,968,635 | - | DvMF_3145 | 0.71 | -0.4 | |
3,968,681 | - | DvMF_3145 | 0.75 | -1.1 | |
3,968,777 | + | DvMF_3145 | 0.82 | -0.9 | |
3,969,343 | - | -1.4 | |||
3,969,352 | - | -0.5 | |||
3,969,494 | + | DvMF_3146 | 0.25 | -1.1 | |
3,969,703 | + | DvMF_3146 | 0.50 | -3.8 | |
3,969,857 | + | DvMF_3146 | 0.67 | -2.6 |
Or see this region's nucleotide sequence