Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3062
Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,865,828 | - | DvMF_3061 | 0.62 | +1.0 | |
3,865,991 | - | DvMF_3061 | 0.70 | -0.0 | |
3,866,111 | - | DvMF_3061 | 0.76 | -1.8 | |
3,866,118 | - | +0.2 | |||
3,866,294 | - | DvMF_3061 | 0.85 | -0.3 | |
3,866,296 | - | DvMF_3061 | 0.85 | -0.9 | |
3,866,469 | - | -0.3 | |||
3,866,700 | + | -1.1 | |||
3,866,721 | - | -0.8 | |||
3,866,811 | - | -0.0 | |||
3,867,007 | + | DvMF_3062 | 0.15 | -0.9 | |
3,867,211 | - | DvMF_3062 | 0.29 | -0.6 | |
3,867,339 | - | DvMF_3062 | 0.38 | +0.2 | |
3,867,493 | + | DvMF_3062 | 0.49 | -0.3 | |
3,867,562 | - | DvMF_3062 | 0.54 | -0.7 | |
3,867,674 | + | DvMF_3062 | 0.62 | +0.1 | |
3,867,778 | + | DvMF_3062 | 0.69 | -0.2 | |
3,867,972 | + | DvMF_3062 | 0.83 | -0.1 | |
3,867,972 | + | DvMF_3062 | 0.83 | -0.7 | |
3,868,194 | - | -0.6 | |||
3,868,298 | + | -1.8 | |||
3,868,298 | + | -0.7 | |||
3,868,333 | - | -0.5 |
Or see this region's nucleotide sequence