Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2710 and DvMF_2711 are separated by 215 nucleotides DvMF_2711 and DvMF_2712 are separated by 9 nucleotides DvMF_2712 and DvMF_2713 are separated by 171 nucleotides
DvMF_2710: DvMF_2710 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 3,430,110 to 3,431,855
_2710
DvMF_2711: DvMF_2711 - cytochrome c family protein (RefSeq), at 3,432,071 to 3,432,541
_2711
DvMF_2712: DvMF_2712 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 3,432,551 to 3,434,572
_2712
DvMF_2713: DvMF_2713 - 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq), at 3,434,744 to 3,436,714
_2713
Position (kb)
3432
3433
3434
3435 Strain fitness (log2 ratio)
-1
0
1 at 3431.849 kb on + strand at 3431.857 kb on - strand at 3432.116 kb on - strand at 3432.169 kb on - strand, within DvMF_2711 at 3432.304 kb on - strand, within DvMF_2711 at 3432.339 kb on - strand, within DvMF_2711 at 3432.608 kb on + strand at 3432.790 kb on + strand, within DvMF_2712 at 3432.892 kb on - strand, within DvMF_2712 at 3433.192 kb on + strand, within DvMF_2712 at 3433.243 kb on + strand, within DvMF_2712 at 3433.532 kb on - strand, within DvMF_2712 at 3433.561 kb on + strand, within DvMF_2712 at 3433.604 kb on + strand, within DvMF_2712 at 3433.954 kb on - strand, within DvMF_2712 at 3434.228 kb on + strand, within DvMF_2712 at 3434.345 kb on - strand, within DvMF_2712 at 3434.364 kb on + strand, within DvMF_2712 at 3434.453 kb on - strand at 3434.581 kb on + strand at 3435.007 kb on - strand, within DvMF_2713 at 3435.040 kb on - strand, within DvMF_2713 at 3435.126 kb on + strand, within DvMF_2713
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with D-Cycloserine 0.25 mg/ml remove 3,431,849 + -1.4 3,431,857 - +0.1 3,432,116 - +0.5 3,432,169 - DvMF_2711 0.21 -0.7 3,432,304 - DvMF_2711 0.49 -0.3 3,432,339 - DvMF_2711 0.57 -0.6 3,432,608 + -0.5 3,432,790 + DvMF_2712 0.12 -0.8 3,432,892 - DvMF_2712 0.17 -0.5 3,433,192 + DvMF_2712 0.32 +0.8 3,433,243 + DvMF_2712 0.34 +0.7 3,433,532 - DvMF_2712 0.49 -1.2 3,433,561 + DvMF_2712 0.50 -1.4 3,433,604 + DvMF_2712 0.52 -0.1 3,433,954 - DvMF_2712 0.69 +0.1 3,434,228 + DvMF_2712 0.83 -0.6 3,434,345 - DvMF_2712 0.89 -0.2 3,434,364 + DvMF_2712 0.90 -0.1 3,434,453 - -1.6 3,434,581 + +0.0 3,435,007 - DvMF_2713 0.13 -1.0 3,435,040 - DvMF_2713 0.15 -0.9 3,435,126 + DvMF_2713 0.19 -0.3
Or see this region's nucleotide sequence