Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2461
Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,103,679 | + | frdB | DvMF_2460 | 0.18 | -1.6 |
3,103,819 | - | frdB | DvMF_2460 | 0.37 | -1.2 |
3,104,071 | - | frdB | DvMF_2460 | 0.71 | -0.4 |
3,104,241 | + | -1.5 | |||
3,104,249 | - | -1.0 | |||
3,104,435 | + | -0.2 | |||
3,104,856 | - | DvMF_2461 | 0.31 | -1.1 | |
3,104,944 | + | DvMF_2461 | 0.42 | +0.1 | |
3,105,343 | - | DvMF_2461 | 0.89 | -0.5 | |
3,105,348 | + | DvMF_2461 | 0.90 | -0.4 | |
3,105,555 | + | -0.8 | |||
3,105,767 | + | -0.5 | |||
3,105,834 | + | DvMF_2462 | 0.16 | -0.1 | |
3,105,834 | + | DvMF_2462 | 0.16 | +0.2 | |
3,105,842 | - | DvMF_2462 | 0.18 | +0.2 | |
3,105,842 | - | DvMF_2462 | 0.18 | -0.5 | |
3,105,842 | - | DvMF_2462 | 0.18 | -0.6 | |
3,105,868 | - | DvMF_2462 | 0.23 | -0.1 | |
3,105,902 | + | DvMF_2462 | 0.29 | -0.8 | |
3,105,972 | - | DvMF_2462 | 0.42 | -0.7 | |
3,106,013 | - | DvMF_2462 | 0.50 | -0.5 | |
3,106,085 | + | DvMF_2462 | 0.64 | -0.9 | |
3,106,093 | - | DvMF_2462 | 0.65 | -0.7 | |
3,106,311 | + | +0.2 | |||
3,106,336 | + | +0.2 |
Or see this region's nucleotide sequence