Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2402
Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,034,495 | + | DvMF_2401 | 0.43 | -2.5 | |
3,035,151 | + | -0.2 | |||
3,035,151 | + | -0.4 | |||
3,035,603 | - | -0.3 | |||
3,035,743 | - | DvMF_2402 | 0.18 | -2.7 | |
3,035,899 | + | DvMF_2402 | 0.28 | -3.2 | |
3,035,924 | - | DvMF_2402 | 0.29 | -3.2 | |
3,036,128 | + | DvMF_2402 | 0.42 | -2.6 | |
3,036,145 | + | DvMF_2402 | 0.43 | -1.3 | |
3,036,279 | - | DvMF_2402 | 0.51 | -2.1 | |
3,036,374 | - | DvMF_2402 | 0.57 | -2.3 | |
3,036,388 | + | DvMF_2402 | 0.58 | -0.8 | |
3,036,610 | + | DvMF_2402 | 0.72 | -0.2 | |
3,037,012 | + | -2.3 | |||
3,037,475 | + | -0.8 | |||
3,037,564 | - | -0.1 | |||
3,037,671 | - | -0.6 | |||
3,037,686 | - | DvMF_2403 | 0.10 | -0.3 | |
3,037,770 | + | DvMF_2403 | 0.50 | -0.3 | |
3,037,802 | - | DvMF_2403 | 0.65 | +0.0 | |
3,038,028 | - | +0.1 | |||
3,038,028 | - | -0.8 |
Or see this region's nucleotide sequence