Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2352

Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2351 and DvMF_2352 are separated by 683 nucleotidesDvMF_2352 and DvMF_2353 are separated by 326 nucleotides DvMF_2351: DvMF_2351 - aminodeoxychorismate lyase (RefSeq), at 2,963,516 to 2,965,378 _2351 DvMF_2352: DvMF_2352 - Holliday junction resolvase YqgF (RefSeq), at 2,966,062 to 2,966,490 _2352 DvMF_2353: DvMF_2353 - FAD linked oxidase domain protein (RefSeq), at 2,966,817 to 2,970,431 _2353 Position (kb) 2966 2967Strain fitness (log2 ratio) -2 -1 0 1at 2965.243 kb on - strandat 2965.604 kb on + strandat 2965.671 kb on - strandat 2965.968 kb on + strandat 2966.485 kb on + strandat 2966.548 kb on + strandat 2966.731 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with D-Cycloserine 0.25 mg/ml
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2,965,243 - -2.7
2,965,604 + -1.1
2,965,671 - -0.8
2,965,968 + +0.5
2,966,485 + -0.6
2,966,548 + -1.0
2,966,731 + +0.5

Or see this region's nucleotide sequence