Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1564
Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,928,390 | - | DvMF_1563 | 0.46 | -1.1 | |
1,928,429 | + | DvMF_1563 | 0.49 | -1.4 | |
1,928,627 | - | DvMF_1563 | 0.66 | -0.6 | |
1,928,724 | - | DvMF_1563 | 0.74 | +1.2 | |
1,928,724 | - | DvMF_1563 | 0.74 | -0.6 | |
1,929,091 | - | -1.0 | |||
1,929,278 | - | DvMF_1564 | 0.20 | -0.3 | |
1,929,553 | + | DvMF_1564 | 0.43 | -1.3 | |
1,929,643 | + | DvMF_1564 | 0.50 | -1.2 | |
1,929,672 | + | DvMF_1564 | 0.53 | -1.0 | |
1,930,161 | - | -1.2 | |||
1,930,161 | - | -0.0 | |||
1,930,211 | - | -0.7 | |||
1,930,293 | - | -0.2 | |||
1,930,391 | - | +0.4 | |||
1,930,391 | - | -1.3 | |||
1,930,391 | - | -0.6 | |||
1,930,391 | - | -0.1 | |||
1,930,736 | + | DvMF_1565 | 0.18 | -0.6 | |
1,930,783 | + | DvMF_1565 | 0.25 | -0.1 | |
1,930,793 | + | DvMF_1565 | 0.26 | -0.9 | |
1,930,801 | - | DvMF_1565 | 0.27 | -0.4 | |
1,931,178 | + | DvMF_1565 | 0.82 | -0.6 | |
1,931,191 | - | DvMF_1565 | 0.84 | -0.5 | |
1,931,229 | + | DvMF_1565 | 0.89 | -0.5 |
Or see this region's nucleotide sequence