Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1304
Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with D-Cycloserine 0.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,592,727 | - | DvMF_1303 | 0.27 | -0.6 | |
1,593,090 | + | DvMF_1303 | 0.58 | -1.4 | |
1,593,132 | - | DvMF_1303 | 0.61 | -1.2 | |
1,593,147 | - | DvMF_1303 | 0.62 | -0.3 | |
1,593,346 | + | DvMF_1303 | 0.79 | -1.3 | |
1,593,383 | + | DvMF_1303 | 0.83 | -2.3 | |
1,593,383 | + | DvMF_1303 | 0.83 | -1.2 | |
1,593,391 | - | DvMF_1303 | 0.83 | -1.5 | |
1,593,391 | - | DvMF_1303 | 0.83 | -1.5 | |
1,593,391 | - | DvMF_1303 | 0.83 | -3.0 | |
1,593,391 | - | DvMF_1303 | 0.83 | -0.5 | |
1,593,526 | + | -0.1 | |||
1,593,548 | - | -1.2 | |||
1,593,892 | + | DvMF_1304 | 0.45 | -0.9 | |
1,593,954 | - | DvMF_1304 | 0.54 | -0.6 | |
1,594,239 | - | -0.5 | |||
1,594,466 | + | DvMF_1305 | 0.14 | -0.9 | |
1,594,568 | - | DvMF_1305 | 0.21 | -0.5 | |
1,594,667 | - | DvMF_1305 | 0.27 | -0.3 | |
1,594,672 | - | DvMF_1305 | 0.27 | -0.6 | |
1,594,672 | - | DvMF_1305 | 0.27 | -0.2 | |
1,594,700 | - | DvMF_1305 | 0.29 | -0.9 | |
1,594,745 | - | DvMF_1305 | 0.32 | -0.5 | |
1,594,776 | + | DvMF_1305 | 0.34 | -0.5 | |
1,594,901 | + | DvMF_1305 | 0.42 | -0.1 | |
1,594,907 | + | DvMF_1305 | 0.43 | -0.5 | |
1,594,956 | - | DvMF_1305 | 0.46 | -0.4 | |
1,594,989 | - | DvMF_1305 | 0.48 | -1.3 |
Or see this region's nucleotide sequence