Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0676 and DvMF_0677 overlap by 4 nucleotides DvMF_0677 and DvMF_0678 overlap by 4 nucleotides
DvMF_0676: DvMF_0676 - glycosyl transferase group 1 (RefSeq), at 815,337 to 816,461
_0676
DvMF_0677: DvMF_0677 - glycosyl transferase group 1 (RefSeq), at 816,458 to 817,651
_0677
DvMF_0678: DvMF_0678 - polysaccharide biosynthesis protein (RefSeq), at 817,648 to 819,147
_0678
Position (kb) 816
817
818 Strain fitness (log2 ratio) -2
-1
0
1 at 815.541 kb on + strand, within DvMF_0676 at 815.568 kb on - strand, within DvMF_0676 at 815.575 kb on - strand, within DvMF_0676 at 815.662 kb on + strand, within DvMF_0676 at 816.000 kb on - strand, within DvMF_0676 at 816.273 kb on + strand, within DvMF_0676 at 816.281 kb on - strand, within DvMF_0676 at 816.419 kb on + strand at 816.456 kb on + strand at 816.727 kb on + strand, within DvMF_0677 at 816.727 kb on + strand, within DvMF_0677 at 817.009 kb on - strand, within DvMF_0677 at 817.207 kb on - strand, within DvMF_0677 at 817.259 kb on + strand, within DvMF_0677 at 817.266 kb on + strand, within DvMF_0677 at 817.374 kb on - strand, within DvMF_0677 at 817.492 kb on + strand, within DvMF_0677 at 817.641 kb on + strand at 817.663 kb on - strand at 817.881 kb on + strand, within DvMF_0678 at 817.918 kb on + strand, within DvMF_0678 at 817.926 kb on - strand, within DvMF_0678 at 818.322 kb on + strand, within DvMF_0678 at 818.322 kb on + strand, within DvMF_0678 at 818.387 kb on + strand, within DvMF_0678 at 818.395 kb on - strand, within DvMF_0678 at 818.461 kb on - strand, within DvMF_0678 at 818.485 kb on + strand, within DvMF_0678 at 818.564 kb on - strand, within DvMF_0678 at 818.601 kb on + strand, within DvMF_0678 at 818.601 kb on + strand, within DvMF_0678 at 818.609 kb on - strand, within DvMF_0678
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with D-Cycloserine 0.25 mg/ml remove 815,541 + DvMF_0676 0.18 -0.0 815,568 - DvMF_0676 0.21 +0.5 815,575 - DvMF_0676 0.21 -0.7 815,662 + DvMF_0676 0.29 -0.3 816,000 - DvMF_0676 0.59 -0.9 816,273 + DvMF_0676 0.83 -0.8 816,281 - DvMF_0676 0.84 +0.1 816,419 + -2.5 816,456 + -0.9 816,727 + DvMF_0677 0.23 -0.2 816,727 + DvMF_0677 0.23 -0.6 817,009 - DvMF_0677 0.46 +0.2 817,207 - DvMF_0677 0.63 -0.4 817,259 + DvMF_0677 0.67 -0.4 817,266 + DvMF_0677 0.68 -0.5 817,374 - DvMF_0677 0.77 -0.5 817,492 + DvMF_0677 0.87 -0.3 817,641 + -2.2 817,663 - -0.8 817,881 + DvMF_0678 0.16 -1.1 817,918 + DvMF_0678 0.18 -0.2 817,926 - DvMF_0678 0.19 -0.4 818,322 + DvMF_0678 0.45 -0.6 818,322 + DvMF_0678 0.45 -0.9 818,387 + DvMF_0678 0.49 -0.4 818,395 - DvMF_0678 0.50 -1.2 818,461 - DvMF_0678 0.54 -1.1 818,485 + DvMF_0678 0.56 +0.3 818,564 - DvMF_0678 0.61 -0.5 818,601 + DvMF_0678 0.64 -0.5 818,601 + DvMF_0678 0.64 -0.5 818,609 - DvMF_0678 0.64 +0.7
Or see this region's nucleotide sequence