Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0634 and DvMF_0635 are separated by 150 nucleotides DvMF_0635 and DvMF_0636 overlap by 4 nucleotides
DvMF_0634: DvMF_0634 - metal dependent phosphohydrolase (RefSeq), at 756,457 to 758,001
_0634
DvMF_0635: DvMF_0635 - protein of unknown function DUF182 (RefSeq), at 758,152 to 759,240
_0635
DvMF_0636: DvMF_0636 - coenzyme F390 synthetase-like protein (RefSeq), at 759,237 to 760,457
_0636
Position (kb) 758
759
760 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 757.422 kb on - strand, within DvMF_0634 at 757.725 kb on + strand, within DvMF_0634 at 757.778 kb on - strand, within DvMF_0634 at 757.870 kb on - strand at 758.224 kb on + strand at 758.237 kb on - strand at 758.393 kb on + strand, within DvMF_0635 at 758.403 kb on + strand, within DvMF_0635 at 758.442 kb on + strand, within DvMF_0635 at 758.450 kb on - strand, within DvMF_0635 at 759.003 kb on + strand, within DvMF_0635 at 759.030 kb on - strand, within DvMF_0635 at 759.092 kb on - strand, within DvMF_0635 at 759.260 kb on + strand at 759.260 kb on + strand at 759.308 kb on - strand at 759.490 kb on - strand, within DvMF_0636 at 759.506 kb on + strand, within DvMF_0636 at 759.581 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.588 kb on + strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.596 kb on - strand, within DvMF_0636 at 759.665 kb on + strand, within DvMF_0636 at 759.704 kb on - strand, within DvMF_0636 at 759.920 kb on + strand, within DvMF_0636 at 759.920 kb on + strand, within DvMF_0636 at 760.200 kb on - strand, within DvMF_0636
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with D-Cycloserine 0.25 mg/ml remove 757,422 - DvMF_0634 0.62 -0.8 757,725 + DvMF_0634 0.82 -0.7 757,778 - DvMF_0634 0.86 -0.2 757,870 - -0.2 758,224 + -1.6 758,237 - -1.3 758,393 + DvMF_0635 0.22 -1.7 758,403 + DvMF_0635 0.23 -0.4 758,442 + DvMF_0635 0.27 -2.2 758,450 - DvMF_0635 0.27 -0.7 759,003 + DvMF_0635 0.78 +0.3 759,030 - DvMF_0635 0.81 -1.0 759,092 - DvMF_0635 0.86 -0.8 759,260 + -0.1 759,260 + -0.5 759,308 - -0.4 759,490 - DvMF_0636 0.21 -0.8 759,506 + DvMF_0636 0.22 -3.5 759,581 + DvMF_0636 0.28 -0.8 759,588 + DvMF_0636 0.29 -1.2 759,588 + DvMF_0636 0.29 -0.2 759,588 + DvMF_0636 0.29 -1.2 759,588 + DvMF_0636 0.29 -0.4 759,596 - DvMF_0636 0.29 -0.8 759,596 - DvMF_0636 0.29 -1.0 759,596 - DvMF_0636 0.29 -0.6 759,596 - DvMF_0636 0.29 -0.3 759,665 + DvMF_0636 0.35 -1.5 759,704 - DvMF_0636 0.38 -2.2 759,920 + DvMF_0636 0.56 -2.3 759,920 + DvMF_0636 0.56 +0.3 760,200 - DvMF_0636 0.79 +0.8
Or see this region's nucleotide sequence