Experiment: MoYLS4 with D-Cycloserine 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0461 and DvMF_0462 are separated by 110 nucleotides DvMF_0462 and DvMF_0463 are separated by 62 nucleotides DvMF_0463 and DvMF_0464 are separated by 134 nucleotides DvMF_0464 and DvMF_0465 are separated by 120 nucleotides
DvMF_0461: DvMF_0461 - Camphor resistance CrcB protein (RefSeq), at 540,863 to 541,237
_0461
DvMF_0462: DvMF_0462 - protein of unknown function DUF190 (RefSeq), at 541,348 to 541,743
_0462
DvMF_0463: DvMF_0463 - GCN5-related N-acetyltransferase (RefSeq), at 541,806 to 542,342
_0463
DvMF_0464: DvMF_0464 - nitrite and sulphite reductase 4Fe-4S region (RefSeq), at 542,477 to 543,154
_0464
DvMF_0465: DvMF_0465 - response regulator receiver modulated CheB methylesterase (RefSeq), at 543,275 to 544,345
_0465
Position (kb) 541
542
543 Strain fitness (log2 ratio) -2
-1
0
1 at 540.901 kb on + strand, within DvMF_0461 at 541.173 kb on - strand, within DvMF_0461 at 541.253 kb on + strand at 541.281 kb on - strand at 541.370 kb on + strand at 541.641 kb on - strand, within DvMF_0462 at 541.738 kb on + strand at 542.136 kb on + strand, within DvMF_0463 at 542.555 kb on - strand, within DvMF_0464 at 542.786 kb on + strand, within DvMF_0464 at 542.809 kb on - strand, within DvMF_0464 at 542.896 kb on + strand, within DvMF_0464 at 542.904 kb on - strand, within DvMF_0464 at 542.966 kb on + strand, within DvMF_0464 at 543.220 kb on - strand at 543.266 kb on + strand at 543.274 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with D-Cycloserine 0.25 mg/ml remove 540,901 + DvMF_0461 0.10 -0.0 541,173 - DvMF_0461 0.83 -0.5 541,253 + -0.3 541,281 - -0.2 541,370 + -0.6 541,641 - DvMF_0462 0.74 +0.1 541,738 + -1.0 542,136 + DvMF_0463 0.61 -2.4 542,555 - DvMF_0464 0.12 -0.2 542,786 + DvMF_0464 0.46 -0.2 542,809 - DvMF_0464 0.49 -1.6 542,896 + DvMF_0464 0.62 -0.1 542,904 - DvMF_0464 0.63 -0.6 542,966 + DvMF_0464 0.72 -0.3 543,220 - -0.6 543,266 + -0.4 543,274 - +0.4
Or see this region's nucleotide sequence