Experiment: m.b. Zinc 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3057 and Dshi_3058 are separated by 288 nucleotides Dshi_3058 and Dshi_3059 are separated by 3 nucleotides
Dshi_3057: Dshi_3057 - MJ0042 family finger-like protein (RefSeq), at 3,224,908 to 3,225,654
_3057
Dshi_3058: Dshi_3058 - hypothetical protein (RefSeq), at 3,225,943 to 3,228,627
_3058
Dshi_3059: Dshi_3059 - diaminopimelate decarboxylase (RefSeq), at 3,228,631 to 3,229,926
_3059
Position (kb)
3225
3226
3227
3228
3229 Strain fitness (log2 ratio)
-2
-1
0
1 at 3225.746 kb on + strand at 3225.870 kb on - strand at 3226.090 kb on - strand at 3226.090 kb on - strand at 3226.154 kb on + strand at 3226.632 kb on + strand, within Dshi_3058 at 3226.640 kb on - strand, within Dshi_3058 at 3226.710 kb on - strand, within Dshi_3058 at 3226.829 kb on + strand, within Dshi_3058 at 3226.835 kb on - strand, within Dshi_3058 at 3226.836 kb on - strand, within Dshi_3058 at 3226.857 kb on - strand, within Dshi_3058 at 3226.918 kb on + strand, within Dshi_3058 at 3226.926 kb on - strand, within Dshi_3058 at 3226.961 kb on + strand, within Dshi_3058 at 3227.063 kb on + strand, within Dshi_3058 at 3227.071 kb on - strand, within Dshi_3058 at 3227.087 kb on + strand, within Dshi_3058 at 3227.095 kb on - strand, within Dshi_3058 at 3227.095 kb on - strand, within Dshi_3058 at 3227.232 kb on + strand, within Dshi_3058 at 3227.346 kb on + strand, within Dshi_3058 at 3227.357 kb on + strand, within Dshi_3058 at 3227.445 kb on - strand, within Dshi_3058 at 3227.600 kb on - strand, within Dshi_3058 at 3227.619 kb on + strand, within Dshi_3058 at 3227.685 kb on - strand, within Dshi_3058 at 3227.768 kb on - strand, within Dshi_3058 at 3227.943 kb on - strand, within Dshi_3058 at 3228.014 kb on - strand, within Dshi_3058 at 3228.128 kb on - strand, within Dshi_3058 at 3228.138 kb on - strand, within Dshi_3058 at 3228.219 kb on - strand, within Dshi_3058 at 3228.293 kb on - strand, within Dshi_3058 at 3228.312 kb on - strand, within Dshi_3058 at 3228.362 kb on - strand at 3228.557 kb on - strand at 3228.574 kb on + strand at 3228.611 kb on + strand at 3228.629 kb on + strand at 3228.629 kb on + strand at 3228.654 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.3 mM remove 3,225,746 + -0.3 3,225,870 - -1.0 3,226,090 - -0.5 3,226,090 - +0.5 3,226,154 + -1.6 3,226,632 + Dshi_3058 0.26 +0.5 3,226,640 - Dshi_3058 0.26 -0.8 3,226,710 - Dshi_3058 0.29 +0.2 3,226,829 + Dshi_3058 0.33 -0.5 3,226,835 - Dshi_3058 0.33 -0.3 3,226,836 - Dshi_3058 0.33 -1.2 3,226,857 - Dshi_3058 0.34 -0.0 3,226,918 + Dshi_3058 0.36 +0.1 3,226,926 - Dshi_3058 0.37 +0.6 3,226,961 + Dshi_3058 0.38 -0.3 3,227,063 + Dshi_3058 0.42 -0.7 3,227,071 - Dshi_3058 0.42 -1.1 3,227,087 + Dshi_3058 0.43 +0.5 3,227,095 - Dshi_3058 0.43 -0.1 3,227,095 - Dshi_3058 0.43 -0.8 3,227,232 + Dshi_3058 0.48 +0.2 3,227,346 + Dshi_3058 0.52 -0.3 3,227,357 + Dshi_3058 0.53 -0.6 3,227,445 - Dshi_3058 0.56 -0.3 3,227,600 - Dshi_3058 0.62 -0.0 3,227,619 + Dshi_3058 0.62 -0.7 3,227,685 - Dshi_3058 0.65 -0.2 3,227,768 - Dshi_3058 0.68 -1.0 3,227,943 - Dshi_3058 0.74 -0.8 3,228,014 - Dshi_3058 0.77 +0.3 3,228,128 - Dshi_3058 0.81 -0.3 3,228,138 - Dshi_3058 0.82 -0.0 3,228,219 - Dshi_3058 0.85 -1.0 3,228,293 - Dshi_3058 0.88 -1.2 3,228,312 - Dshi_3058 0.88 -0.1 3,228,362 - -2.2 3,228,557 - -0.2 3,228,574 + +0.2 3,228,611 + +0.2 3,228,629 + +0.2 3,228,629 + -1.6 3,228,654 + +0.6
Or see this region's nucleotide sequence