Experiment: m.b. Zinc 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3055 and Dshi_3056 overlap by 4 nucleotides Dshi_3056 and Dshi_3057 are separated by 164 nucleotides Dshi_3057 and Dshi_3058 are separated by 288 nucleotides
Dshi_3055: Dshi_3055 - protein of unknown function DUF214 (RefSeq), at 3,223,182 to 3,224,075
_3055
Dshi_3056: Dshi_3056 - ABC transporter related (RefSeq), at 3,224,072 to 3,224,743
_3056
Dshi_3057: Dshi_3057 - MJ0042 family finger-like protein (RefSeq), at 3,224,908 to 3,225,654
_3057
Dshi_3058: Dshi_3058 - hypothetical protein (RefSeq), at 3,225,943 to 3,228,627
_3058
Position (kb)
3224
3225
3226 Strain fitness (log2 ratio)
-2
-1
0
1 at 3224.017 kb on + strand at 3224.077 kb on + strand at 3224.281 kb on + strand, within Dshi_3056 at 3224.438 kb on - strand, within Dshi_3056 at 3224.724 kb on + strand at 3224.746 kb on - strand at 3224.754 kb on - strand at 3224.836 kb on + strand at 3225.746 kb on + strand at 3225.870 kb on - strand at 3226.090 kb on - strand at 3226.090 kb on - strand at 3226.154 kb on + strand at 3226.632 kb on + strand, within Dshi_3058 at 3226.640 kb on - strand, within Dshi_3058
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.3 mM remove 3,224,017 + -0.2 3,224,077 + +0.7 3,224,281 + Dshi_3056 0.31 +0.5 3,224,438 - Dshi_3056 0.54 -0.6 3,224,724 + +0.9 3,224,746 - +1.7 3,224,754 - -0.6 3,224,836 + -2.6 3,225,746 + -0.3 3,225,870 - -1.0 3,226,090 - -0.5 3,226,090 - +0.5 3,226,154 + -1.6 3,226,632 + Dshi_3058 0.26 +0.5 3,226,640 - Dshi_3058 0.26 -0.8
Or see this region's nucleotide sequence