Experiment: m.b. Zinc 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2388 and Dshi_2389 are separated by 12 nucleotides Dshi_2389 and Dshi_2390 are separated by 92 nucleotides Dshi_2390 and Dshi_2391 are separated by 129 nucleotides
Dshi_2388: Dshi_2388 - glycosyl transferase family 2 (RefSeq), at 2,522,050 to 2,523,957
_2388
Dshi_2389: Dshi_2389 - transcriptional regulator, GntR family (RefSeq), at 2,523,970 to 2,524,611
_2389
Dshi_2390: Dshi_2390 - pyrimidine 5'-nucleotidase (RefSeq), at 2,524,704 to 2,525,351
_2390
Dshi_2391: Dshi_2391 - hypothetical protein (RefSeq), at 2,525,481 to 2,525,726
_2391
Position (kb)
2523
2524
2525 Strain fitness (log2 ratio)
-1
0
1
2 at 2523.042 kb on - strand, within Dshi_2388 at 2523.080 kb on - strand, within Dshi_2388 at 2523.141 kb on - strand, within Dshi_2388 at 2523.167 kb on + strand, within Dshi_2388 at 2523.215 kb on + strand, within Dshi_2388 at 2523.270 kb on + strand, within Dshi_2388 at 2523.368 kb on - strand, within Dshi_2388 at 2523.371 kb on + strand, within Dshi_2388 at 2523.507 kb on + strand, within Dshi_2388 at 2523.656 kb on - strand, within Dshi_2388 at 2523.883 kb on + strand at 2524.167 kb on + strand, within Dshi_2389 at 2524.264 kb on - strand, within Dshi_2389 at 2524.264 kb on - strand, within Dshi_2389 at 2524.284 kb on - strand, within Dshi_2389 at 2524.603 kb on - strand at 2524.735 kb on - strand at 2524.872 kb on + strand, within Dshi_2390 at 2525.003 kb on + strand, within Dshi_2390 at 2525.003 kb on + strand, within Dshi_2390 at 2525.149 kb on - strand, within Dshi_2390 at 2525.207 kb on + strand, within Dshi_2390 at 2525.428 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.3 mM remove 2,523,042 - Dshi_2388 0.52 -0.4 2,523,080 - Dshi_2388 0.54 -0.3 2,523,141 - Dshi_2388 0.57 +0.4 2,523,167 + Dshi_2388 0.59 +0.2 2,523,215 + Dshi_2388 0.61 -0.4 2,523,270 + Dshi_2388 0.64 -0.0 2,523,368 - Dshi_2388 0.69 +0.1 2,523,371 + Dshi_2388 0.69 +0.4 2,523,507 + Dshi_2388 0.76 -0.6 2,523,656 - Dshi_2388 0.84 -0.8 2,523,883 + +0.4 2,524,167 + Dshi_2389 0.31 +1.7 2,524,264 - Dshi_2389 0.46 -0.3 2,524,264 - Dshi_2389 0.46 -0.0 2,524,284 - Dshi_2389 0.49 +2.3 2,524,603 - -0.3 2,524,735 - +1.0 2,524,872 + Dshi_2390 0.26 +0.8 2,525,003 + Dshi_2390 0.46 +0.2 2,525,003 + Dshi_2390 0.46 -0.4 2,525,149 - Dshi_2390 0.69 +0.5 2,525,207 + Dshi_2390 0.78 -0.3 2,525,428 + +0.2
Or see this region's nucleotide sequence