Experiment: m.b. Zinc 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2387 and Dshi_2388 are separated by 79 nucleotides Dshi_2388 and Dshi_2389 are separated by 12 nucleotides Dshi_2389 and Dshi_2390 are separated by 92 nucleotides
Dshi_2387: Dshi_2387 - carbamoyl-phosphate synthase, small subunit (RefSeq), at 2,520,801 to 2,521,970
_2387
Dshi_2388: Dshi_2388 - glycosyl transferase family 2 (RefSeq), at 2,522,050 to 2,523,957
_2388
Dshi_2389: Dshi_2389 - transcriptional regulator, GntR family (RefSeq), at 2,523,970 to 2,524,611
_2389
Dshi_2390: Dshi_2390 - pyrimidine 5'-nucleotidase (RefSeq), at 2,524,704 to 2,525,351
_2390
Position (kb)
2522
2523
2524 Strain fitness (log2 ratio)
-1
0
1
2 at 2522.410 kb on - strand, within Dshi_2388 at 2522.430 kb on + strand, within Dshi_2388 at 2522.552 kb on + strand, within Dshi_2388 at 2522.603 kb on + strand, within Dshi_2388 at 2522.653 kb on - strand, within Dshi_2388 at 2522.749 kb on - strand, within Dshi_2388 at 2522.851 kb on + strand, within Dshi_2388 at 2522.920 kb on - strand, within Dshi_2388 at 2522.949 kb on + strand, within Dshi_2388 at 2523.042 kb on - strand, within Dshi_2388 at 2523.080 kb on - strand, within Dshi_2388 at 2523.141 kb on - strand, within Dshi_2388 at 2523.167 kb on + strand, within Dshi_2388 at 2523.215 kb on + strand, within Dshi_2388 at 2523.270 kb on + strand, within Dshi_2388 at 2523.368 kb on - strand, within Dshi_2388 at 2523.371 kb on + strand, within Dshi_2388 at 2523.507 kb on + strand, within Dshi_2388 at 2523.656 kb on - strand, within Dshi_2388 at 2523.883 kb on + strand at 2524.167 kb on + strand, within Dshi_2389 at 2524.264 kb on - strand, within Dshi_2389 at 2524.264 kb on - strand, within Dshi_2389 at 2524.284 kb on - strand, within Dshi_2389 at 2524.603 kb on - strand at 2524.735 kb on - strand at 2524.872 kb on + strand, within Dshi_2390
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.3 mM remove 2,522,410 - Dshi_2388 0.19 -0.6 2,522,430 + Dshi_2388 0.20 +0.0 2,522,552 + Dshi_2388 0.26 +0.2 2,522,603 + Dshi_2388 0.29 -1.7 2,522,653 - Dshi_2388 0.32 -1.7 2,522,749 - Dshi_2388 0.37 +0.0 2,522,851 + Dshi_2388 0.42 +0.6 2,522,920 - Dshi_2388 0.46 -1.0 2,522,949 + Dshi_2388 0.47 -0.3 2,523,042 - Dshi_2388 0.52 -0.4 2,523,080 - Dshi_2388 0.54 -0.3 2,523,141 - Dshi_2388 0.57 +0.4 2,523,167 + Dshi_2388 0.59 +0.2 2,523,215 + Dshi_2388 0.61 -0.4 2,523,270 + Dshi_2388 0.64 -0.0 2,523,368 - Dshi_2388 0.69 +0.1 2,523,371 + Dshi_2388 0.69 +0.4 2,523,507 + Dshi_2388 0.76 -0.6 2,523,656 - Dshi_2388 0.84 -0.8 2,523,883 + +0.4 2,524,167 + Dshi_2389 0.31 +1.7 2,524,264 - Dshi_2389 0.46 -0.3 2,524,264 - Dshi_2389 0.46 -0.0 2,524,284 - Dshi_2389 0.49 +2.3 2,524,603 - -0.3 2,524,735 - +1.0 2,524,872 + Dshi_2390 0.26 +0.8
Or see this region's nucleotide sequence