Experiment: m.b. Zinc 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0551 and Dshi_0552 overlap by 4 nucleotides Dshi_0552 and Dshi_0553 are separated by 3 nucleotides
Dshi_0551: Dshi_0551 - D-xylulose reductase (EC 1.1.1.9) <small>(from data)</small>, at 538,237 to 539,280
_0551
Dshi_0552: Dshi_0552 - sugar isomerase (SIS) (RefSeq), at 539,277 to 539,843
_0552
Dshi_0553: Dshi_0553 - short-chain dehydrogenase/reductase SDR (RefSeq), at 539,847 to 540,614
_0553
Position (kb) 539
540 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 538.305 kb on + strand at 538.310 kb on + strand at 538.310 kb on + strand at 538.350 kb on - strand, within Dshi_0551 at 538.368 kb on + strand, within Dshi_0551 at 538.376 kb on - strand, within Dshi_0551 at 538.378 kb on - strand, within Dshi_0551 at 538.476 kb on + strand, within Dshi_0551 at 538.494 kb on + strand, within Dshi_0551 at 538.523 kb on + strand, within Dshi_0551 at 538.532 kb on + strand, within Dshi_0551 at 538.572 kb on + strand, within Dshi_0551 at 538.572 kb on + strand, within Dshi_0551 at 538.581 kb on + strand, within Dshi_0551 at 538.585 kb on - strand, within Dshi_0551 at 538.591 kb on + strand, within Dshi_0551 at 538.613 kb on + strand, within Dshi_0551 at 538.618 kb on - strand, within Dshi_0551 at 538.637 kb on + strand, within Dshi_0551 at 538.688 kb on - strand, within Dshi_0551 at 538.757 kb on + strand, within Dshi_0551 at 538.882 kb on + strand, within Dshi_0551 at 538.940 kb on - strand, within Dshi_0551 at 539.118 kb on + strand, within Dshi_0551 at 539.127 kb on - strand, within Dshi_0551 at 539.231 kb on + strand at 539.357 kb on + strand, within Dshi_0552 at 539.432 kb on - strand, within Dshi_0552 at 539.625 kb on - strand, within Dshi_0552 at 539.678 kb on + strand, within Dshi_0552 at 539.681 kb on - strand, within Dshi_0552 at 539.700 kb on + strand, within Dshi_0552 at 539.708 kb on - strand, within Dshi_0552 at 539.708 kb on - strand, within Dshi_0552 at 539.710 kb on + strand, within Dshi_0552 at 539.710 kb on + strand, within Dshi_0552 at 539.742 kb on + strand, within Dshi_0552 at 539.750 kb on - strand, within Dshi_0552 at 539.796 kb on - strand at 539.796 kb on - strand at 539.796 kb on - strand at 539.798 kb on + strand at 539.812 kb on - strand at 539.813 kb on - strand at 539.833 kb on + strand at 539.876 kb on + strand at 539.876 kb on + strand at 539.884 kb on - strand at 539.926 kb on + strand, within Dshi_0553 at 539.928 kb on + strand, within Dshi_0553 at 539.970 kb on + strand, within Dshi_0553 at 539.971 kb on + strand, within Dshi_0553 at 539.976 kb on + strand, within Dshi_0553 at 539.976 kb on + strand, within Dshi_0553 at 539.979 kb on - strand, within Dshi_0553 at 539.984 kb on - strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.008 kb on + strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.016 kb on - strand, within Dshi_0553 at 540.043 kb on + strand, within Dshi_0553 at 540.091 kb on - strand, within Dshi_0553 at 540.092 kb on - strand, within Dshi_0553 at 540.092 kb on - strand, within Dshi_0553 at 540.141 kb on + strand, within Dshi_0553 at 540.141 kb on + strand, within Dshi_0553 at 540.144 kb on - strand, within Dshi_0553 at 540.149 kb on - strand, within Dshi_0553 at 540.196 kb on + strand, within Dshi_0553 at 540.204 kb on - strand, within Dshi_0553 at 540.222 kb on - strand, within Dshi_0553 at 540.224 kb on + strand, within Dshi_0553 at 540.224 kb on + strand, within Dshi_0553 at 540.232 kb on - strand, within Dshi_0553 at 540.247 kb on - strand, within Dshi_0553 at 540.271 kb on - strand, within Dshi_0553 at 540.294 kb on + strand, within Dshi_0553 at 540.294 kb on + strand, within Dshi_0553 at 540.294 kb on + strand, within Dshi_0553 at 540.294 kb on + strand, within Dshi_0553 at 540.302 kb on - strand, within Dshi_0553 at 540.302 kb on - strand, within Dshi_0553 at 540.302 kb on - strand, within Dshi_0553 at 540.302 kb on - strand, within Dshi_0553 at 540.321 kb on + strand, within Dshi_0553 at 540.332 kb on + strand, within Dshi_0553 at 540.338 kb on - strand, within Dshi_0553 at 540.338 kb on - strand, within Dshi_0553 at 540.338 kb on - strand, within Dshi_0553 at 540.339 kb on - strand, within Dshi_0553 at 540.339 kb on - strand, within Dshi_0553 at 540.344 kb on + strand, within Dshi_0553 at 540.351 kb on + strand, within Dshi_0553 at 540.351 kb on + strand, within Dshi_0553 at 540.356 kb on + strand, within Dshi_0553 at 540.364 kb on - strand, within Dshi_0553 at 540.398 kb on + strand, within Dshi_0553 at 540.398 kb on + strand, within Dshi_0553 at 540.398 kb on + strand, within Dshi_0553 at 540.398 kb on + strand, within Dshi_0553 at 540.398 kb on + strand, within Dshi_0553 at 540.399 kb on - strand, within Dshi_0553 at 540.401 kb on - strand, within Dshi_0553 at 540.406 kb on + strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.406 kb on - strand, within Dshi_0553 at 540.415 kb on + strand, within Dshi_0553 at 540.418 kb on + strand, within Dshi_0553 at 540.418 kb on + strand, within Dshi_0553 at 540.426 kb on - strand, within Dshi_0553 at 540.426 kb on - strand, within Dshi_0553 at 540.426 kb on - strand, within Dshi_0553 at 540.431 kb on - strand, within Dshi_0553 at 540.452 kb on - strand, within Dshi_0553 at 540.457 kb on - strand, within Dshi_0553 at 540.474 kb on - strand, within Dshi_0553 at 540.483 kb on + strand, within Dshi_0553 at 540.488 kb on + strand, within Dshi_0553 at 540.534 kb on + strand, within Dshi_0553 at 540.539 kb on + strand at 540.539 kb on + strand at 540.542 kb on - strand at 540.542 kb on - strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.556 kb on + strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.564 kb on - strand at 540.574 kb on - strand at 540.574 kb on - strand at 540.574 kb on - strand at 540.574 kb on - strand at 540.574 kb on - strand at 540.579 kb on + strand at 540.579 kb on + strand at 540.587 kb on - strand at 540.594 kb on + strand at 540.597 kb on + strand at 540.607 kb on + strand at 540.612 kb on + strand at 540.618 kb on + strand at 540.618 kb on + strand at 540.620 kb on - strand at 540.634 kb on + strand at 540.637 kb on - strand at 540.639 kb on + strand at 540.639 kb on + strand at 540.639 kb on + strand at 540.639 kb on + strand at 540.644 kb on + strand at 540.647 kb on + strand at 540.647 kb on - strand at 540.649 kb on + strand at 540.649 kb on + strand at 540.652 kb on - strand at 540.654 kb on + strand at 540.654 kb on + strand at 540.657 kb on - strand at 540.672 kb on + strand at 540.673 kb on + strand at 540.686 kb on - strand at 540.705 kb on - strand at 540.743 kb on + strand at 540.776 kb on - strand at 540.802 kb on + strand at 540.802 kb on + strand at 540.805 kb on - strand at 540.806 kb on + strand at 540.806 kb on + strand at 540.810 kb on - strand at 540.811 kb on + strand at 540.812 kb on + strand at 540.819 kb on - strand at 540.819 kb on - strand at 540.819 kb on - strand at 540.819 kb on - strand at 540.819 kb on - strand at 540.819 kb on - strand at 540.821 kb on - strand at 540.828 kb on + strand at 540.837 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.3 mM remove 538,305 + -0.8 538,310 + +0.3 538,310 + -1.3 538,350 - Dshi_0551 0.11 +0.6 538,368 + Dshi_0551 0.13 +0.1 538,376 - Dshi_0551 0.13 -1.9 538,378 - Dshi_0551 0.14 +0.2 538,476 + Dshi_0551 0.23 +0.5 538,494 + Dshi_0551 0.25 +0.4 538,523 + Dshi_0551 0.27 -0.7 538,532 + Dshi_0551 0.28 -0.3 538,572 + Dshi_0551 0.32 +0.1 538,572 + Dshi_0551 0.32 -0.1 538,581 + Dshi_0551 0.33 +0.1 538,585 - Dshi_0551 0.33 -0.8 538,591 + Dshi_0551 0.34 -0.2 538,613 + Dshi_0551 0.36 -1.7 538,618 - Dshi_0551 0.36 -0.3 538,637 + Dshi_0551 0.38 +1.4 538,688 - Dshi_0551 0.43 -0.2 538,757 + Dshi_0551 0.50 -1.0 538,882 + Dshi_0551 0.62 -0.3 538,940 - Dshi_0551 0.67 -0.9 539,118 + Dshi_0551 0.84 -0.6 539,127 - Dshi_0551 0.85 +0.9 539,231 + +1.1 539,357 + Dshi_0552 0.14 -0.9 539,432 - Dshi_0552 0.27 +1.7 539,625 - Dshi_0552 0.61 +0.3 539,678 + Dshi_0552 0.71 -0.7 539,681 - Dshi_0552 0.71 +0.4 539,700 + Dshi_0552 0.75 -0.9 539,708 - Dshi_0552 0.76 +1.5 539,708 - Dshi_0552 0.76 -0.9 539,710 + Dshi_0552 0.76 +0.0 539,710 + Dshi_0552 0.76 +0.7 539,742 + Dshi_0552 0.82 -0.7 539,750 - Dshi_0552 0.83 +1.1 539,796 - -0.1 539,796 - -0.2 539,796 - +1.3 539,798 + +0.5 539,812 - -0.3 539,813 - -0.2 539,833 + +0.1 539,876 + +0.2 539,876 + -0.0 539,884 - -0.0 539,926 + Dshi_0553 0.10 +0.1 539,928 + Dshi_0553 0.11 -0.1 539,970 + Dshi_0553 0.16 -0.5 539,971 + Dshi_0553 0.16 -1.5 539,976 + Dshi_0553 0.17 -1.1 539,976 + Dshi_0553 0.17 -0.2 539,979 - Dshi_0553 0.17 +0.1 539,984 - Dshi_0553 0.18 +0.9 540,008 + Dshi_0553 0.21 +1.1 540,008 + Dshi_0553 0.21 -0.1 540,008 + Dshi_0553 0.21 +0.6 540,008 + Dshi_0553 0.21 +1.1 540,008 + Dshi_0553 0.21 -0.9 540,008 + Dshi_0553 0.21 -0.1 540,008 + Dshi_0553 0.21 -0.1 540,008 + Dshi_0553 0.21 -0.2 540,008 + Dshi_0553 0.21 -0.9 540,008 + Dshi_0553 0.21 +0.7 540,008 + Dshi_0553 0.21 -0.8 540,008 + Dshi_0553 0.21 +0.1 540,016 - Dshi_0553 0.22 +0.1 540,016 - Dshi_0553 0.22 -0.3 540,016 - Dshi_0553 0.22 -0.3 540,016 - Dshi_0553 0.22 -0.1 540,016 - Dshi_0553 0.22 -0.7 540,016 - Dshi_0553 0.22 +0.4 540,016 - Dshi_0553 0.22 -0.2 540,043 + Dshi_0553 0.26 -0.3 540,091 - Dshi_0553 0.32 +0.6 540,092 - Dshi_0553 0.32 -0.3 540,092 - Dshi_0553 0.32 +0.2 540,141 + Dshi_0553 0.38 -0.2 540,141 + Dshi_0553 0.38 -0.9 540,144 - Dshi_0553 0.39 +1.0 540,149 - Dshi_0553 0.39 -0.3 540,196 + Dshi_0553 0.45 -0.9 540,204 - Dshi_0553 0.46 +0.5 540,222 - Dshi_0553 0.49 -0.8 540,224 + Dshi_0553 0.49 -0.5 540,224 + Dshi_0553 0.49 +1.7 540,232 - Dshi_0553 0.50 -2.2 540,247 - Dshi_0553 0.52 +0.3 540,271 - Dshi_0553 0.55 +2.2 540,294 + Dshi_0553 0.58 -0.6 540,294 + Dshi_0553 0.58 +1.7 540,294 + Dshi_0553 0.58 +0.1 540,294 + Dshi_0553 0.58 -0.5 540,302 - Dshi_0553 0.59 -0.0 540,302 - Dshi_0553 0.59 -0.5 540,302 - Dshi_0553 0.59 +0.9 540,302 - Dshi_0553 0.59 +0.4 540,321 + Dshi_0553 0.62 -0.4 540,332 + Dshi_0553 0.63 +0.6 540,338 - Dshi_0553 0.64 +0.1 540,338 - Dshi_0553 0.64 -0.4 540,338 - Dshi_0553 0.64 +0.3 540,339 - Dshi_0553 0.64 -0.3 540,339 - Dshi_0553 0.64 -0.2 540,344 + Dshi_0553 0.65 +0.3 540,351 + Dshi_0553 0.66 +0.0 540,351 + Dshi_0553 0.66 -1.3 540,356 + Dshi_0553 0.66 -0.9 540,364 - Dshi_0553 0.67 -0.2 540,398 + Dshi_0553 0.72 +0.1 540,398 + Dshi_0553 0.72 -0.4 540,398 + Dshi_0553 0.72 -0.3 540,398 + Dshi_0553 0.72 +0.5 540,398 + Dshi_0553 0.72 -0.6 540,399 - Dshi_0553 0.72 -1.5 540,401 - Dshi_0553 0.72 -0.0 540,406 + Dshi_0553 0.73 +0.3 540,406 - Dshi_0553 0.73 +0.9 540,406 - Dshi_0553 0.73 +0.5 540,406 - Dshi_0553 0.73 -0.2 540,406 - Dshi_0553 0.73 +1.2 540,406 - Dshi_0553 0.73 -0.2 540,406 - Dshi_0553 0.73 -0.6 540,406 - Dshi_0553 0.73 +0.7 540,406 - Dshi_0553 0.73 -0.3 540,406 - Dshi_0553 0.73 -0.5 540,415 + Dshi_0553 0.74 -1.5 540,418 + Dshi_0553 0.74 -0.5 540,418 + Dshi_0553 0.74 -3.2 540,426 - Dshi_0553 0.75 -0.8 540,426 - Dshi_0553 0.75 +0.5 540,426 - Dshi_0553 0.75 -0.5 540,431 - Dshi_0553 0.76 -1.0 540,452 - Dshi_0553 0.79 +0.4 540,457 - Dshi_0553 0.79 -0.0 540,474 - Dshi_0553 0.82 +0.4 540,483 + Dshi_0553 0.83 +1.0 540,488 + Dshi_0553 0.83 +0.8 540,534 + Dshi_0553 0.89 -0.0 540,539 + -1.2 540,539 + +0.6 540,542 - +0.6 540,542 - +0.2 540,556 + +0.1 540,556 + -0.4 540,556 + +0.5 540,556 + -0.6 540,556 + -0.1 540,556 + +0.9 540,556 + +0.4 540,556 + +0.5 540,556 + -0.2 540,556 + +0.5 540,556 + -2.5 540,556 + -0.1 540,556 + -0.9 540,556 + +0.9 540,556 + +0.1 540,556 + +0.7 540,556 + +0.1 540,556 + +0.3 540,556 + +0.3 540,556 + +0.7 540,556 + -0.7 540,556 + -0.2 540,556 + +0.4 540,556 + +0.5 540,556 + -3.2 540,556 + +0.3 540,556 + +0.4 540,556 + -0.7 540,556 + +0.5 540,556 + -0.4 540,556 + +1.3 540,556 + -0.1 540,564 - +0.4 540,564 - -0.3 540,564 - -0.9 540,564 - +0.0 540,564 - -0.8 540,564 - +1.1 540,564 - +0.0 540,564 - -1.1 540,564 - -0.1 540,564 - +0.2 540,564 - +1.7 540,564 - +0.1 540,564 - -1.0 540,564 - +0.3 540,564 - +0.3 540,564 - +0.1 540,564 - -1.5 540,564 - +0.6 540,564 - +0.0 540,564 - -0.2 540,564 - -0.6 540,564 - +0.4 540,564 - -1.0 540,564 - +0.7 540,564 - -1.1 540,564 - -0.5 540,564 - +0.5 540,564 - -0.1 540,564 - +2.0 540,564 - +0.5 540,564 - -1.9 540,574 - +1.1 540,574 - +0.4 540,574 - +0.8 540,574 - +2.1 540,574 - +0.4 540,579 + -0.4 540,579 + -0.9 540,587 - +1.3 540,594 + +0.1 540,597 + -0.4 540,607 + -0.1 540,612 + +0.2 540,618 + -0.3 540,618 + +0.2 540,620 - -0.8 540,634 + -0.9 540,637 - -0.1 540,639 + +1.3 540,639 + +0.3 540,639 + +0.4 540,639 + +1.1 540,644 + -0.9 540,647 + +0.3 540,647 - +0.3 540,649 + +0.2 540,649 + -0.1 540,652 - -0.5 540,654 + -0.1 540,654 + +1.4 540,657 - +0.6 540,672 + +0.1 540,673 + +0.1 540,686 - +1.2 540,705 - -0.9 540,743 + +0.1 540,776 - -1.2 540,802 + -0.4 540,802 + -1.7 540,805 - -0.3 540,806 + +0.1 540,806 + -0.1 540,810 - +0.2 540,811 + -0.4 540,812 + +0.3 540,819 - +1.9 540,819 - -0.1 540,819 - -0.2 540,819 - -0.3 540,819 - -0.6 540,819 - +0.4 540,821 - +0.5 540,828 + +0.9 540,837 - -1.5
Or see this region's nucleotide sequence