Experiment: MoLS4 with Casaminos 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0195 and DORF26313 overlap by 8 nucleotides DORF26313 and DVU0196 are separated by 362 nucleotides DVU0196 and DVU0197 are separated by 3 nucleotides DVU0197 and DVU0198 overlap by 17 nucleotides
DVU0195: DVU0195 - hypothetical protein (TIGR), at 241,444 to 241,662
DVU0195
DORF26313: DORF26313 - no description, at 241,655 to 242,083
DORF26313
DVU0196: DVU0196 - hypothetical protein (TIGR), at 242,446 to 242,586
DVU0196
DVU0197: DVU0197 - phage portal protein, lambda family (TIGR), at 242,590 to 244,290
DVU0197
DVU0198: DVU0198 - minor capsid protein C, degenerate (TIGR), at 244,274 to 245,593
DVU0198
Position (kb) 242
243
244
245 Strain fitness (log2 ratio) -2
-1
0
1 at 241.604 kb on + strand, within DVU0195 at 241.604 kb on + strand, within DVU0195 at 241.604 kb on + strand, within DVU0195 at 241.604 kb on + strand, within DVU0195 at 241.612 kb on - strand, within DVU0195 at 241.726 kb on + strand, within DORF26313 at 241.726 kb on - strand, within DORF26313 at 241.783 kb on + strand, within DORF26313 at 241.976 kb on - strand, within DORF26313 at 242.031 kb on + strand, within DORF26313 at 242.034 kb on - strand, within DORF26313 at 242.050 kb on - strand at 242.075 kb on + strand at 242.077 kb on + strand at 242.077 kb on + strand at 242.140 kb on - strand at 242.162 kb on - strand at 242.181 kb on - strand at 242.206 kb on - strand at 242.206 kb on - strand at 242.330 kb on - strand at 242.347 kb on + strand at 242.347 kb on + strand at 242.442 kb on + strand at 242.543 kb on + strand, within DVU0196 at 242.657 kb on + strand at 242.690 kb on - strand at 242.754 kb on + strand at 242.780 kb on + strand, within DVU0197 at 242.788 kb on - strand, within DVU0197 at 242.788 kb on - strand, within DVU0197 at 242.802 kb on - strand, within DVU0197 at 242.873 kb on + strand, within DVU0197 at 242.950 kb on - strand, within DVU0197 at 243.025 kb on + strand, within DVU0197 at 243.048 kb on + strand, within DVU0197 at 243.121 kb on + strand, within DVU0197 at 243.168 kb on + strand, within DVU0197 at 243.217 kb on + strand, within DVU0197 at 243.396 kb on + strand, within DVU0197 at 243.399 kb on - strand, within DVU0197 at 243.399 kb on - strand, within DVU0197 at 243.407 kb on + strand, within DVU0197 at 243.931 kb on - strand, within DVU0197 at 243.962 kb on - strand, within DVU0197 at 244.162 kb on + strand at 244.225 kb on - strand at 244.264 kb on - strand at 244.349 kb on + strand at 244.349 kb on + strand at 244.485 kb on - strand, within DVU0198 at 244.568 kb on + strand, within DVU0198 at 244.885 kb on + strand, within DVU0198 at 245.056 kb on + strand, within DVU0198 at 245.056 kb on + strand, within DVU0198 at 245.086 kb on - strand, within DVU0198
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Casaminos 0.05% remove 241,604 + DVU0195 0.73 -0.2 241,604 + DVU0195 0.73 -0.8 241,604 + DVU0195 0.73 -0.1 241,604 + DVU0195 0.73 -0.8 241,612 - DVU0195 0.77 -0.5 241,726 + DORF26313 0.17 +0.2 241,726 - DORF26313 0.17 +0.1 241,783 + DORF26313 0.30 +0.0 241,976 - DORF26313 0.75 -2.2 242,031 + DORF26313 0.88 -0.0 242,034 - DORF26313 0.88 -1.2 242,050 - +0.1 242,075 + -0.2 242,077 + -0.1 242,077 + +0.5 242,140 - -0.2 242,162 - +0.3 242,181 - +0.2 242,206 - -0.3 242,206 - -0.2 242,330 - +0.4 242,347 + +0.1 242,347 + +0.7 242,442 + +0.7 242,543 + DVU0196 0.69 +0.5 242,657 + +0.1 242,690 - +0.0 242,754 + -0.0 242,780 + DVU0197 0.11 +0.4 242,788 - DVU0197 0.12 +0.0 242,788 - DVU0197 0.12 +0.1 242,802 - DVU0197 0.12 +0.2 242,873 + DVU0197 0.17 +0.6 242,950 - DVU0197 0.21 -0.5 243,025 + DVU0197 0.26 +0.3 243,048 + DVU0197 0.27 -0.4 243,121 + DVU0197 0.31 +1.5 243,168 + DVU0197 0.34 +1.4 243,217 + DVU0197 0.37 +0.2 243,396 + DVU0197 0.47 +1.0 243,399 - DVU0197 0.48 +0.3 243,399 - DVU0197 0.48 +0.5 243,407 + DVU0197 0.48 -0.1 243,931 - DVU0197 0.79 +0.3 243,962 - DVU0197 0.81 -0.2 244,162 + +0.3 244,225 - -0.4 244,264 - +0.5 244,349 + +0.3 244,349 + +0.7 244,485 - DVU0198 0.16 +0.2 244,568 + DVU0198 0.22 -0.0 244,885 + DVU0198 0.46 +0.3 245,056 + DVU0198 0.59 +0.6 245,056 + DVU0198 0.59 +0.4 245,086 - DVU0198 0.62 +0.4
Or see this region's nucleotide sequence