Experiment: perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_3452 and Ga0059261_3453 are separated by 63 nucleotides Ga0059261_3453 and Ga0059261_3454 are separated by 350 nucleotides Ga0059261_3454 and Ga0059261_3455 overlap by 4 nucleotides
Ga0059261_3452: Ga0059261_3452 - Cysteine synthase, at 3,576,416 to 3,577,408
_3452
Ga0059261_3453: Ga0059261_3453 - hypothetical protein, at 3,577,472 to 3,577,777
_3453
Ga0059261_3454: Ga0059261_3454 - Uncharacterized protein conserved in bacteria, at 3,578,128 to 3,578,637
_3454
Ga0059261_3455: Ga0059261_3455 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase, at 3,578,634 to 3,579,584
_3455
Position (kb)
3577
3578 Strain fitness (log2 ratio)
-2
-1
0
1 at 3576.506 kb on + strand at 3576.506 kb on + strand at 3576.507 kb on - strand at 3576.507 kb on - strand at 3576.507 kb on - strand at 3576.862 kb on + strand at 3577.055 kb on + strand, within Ga0059261_3452 at 3577.055 kb on + strand, within Ga0059261_3452 at 3577.055 kb on + strand, within Ga0059261_3452 at 3577.055 kb on + strand, within Ga0059261_3452 at 3577.058 kb on + strand at 3577.123 kb on + strand at 3577.346 kb on + strand at 3577.347 kb on - strand at 3577.347 kb on - strand at 3577.417 kb on + strand at 3577.417 kb on + strand at 3577.452 kb on + strand at 3577.452 kb on + strand at 3577.757 kb on + strand at 3577.758 kb on - strand at 3577.890 kb on + strand at 3577.890 kb on + strand at 3577.890 kb on + strand at 3577.922 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction perchlorate 50 mM remove 3,576,506 + -2.3 3,576,506 + -1.1 3,576,507 - -1.8 3,576,507 - -0.7 3,576,507 - -1.5 3,576,862 + -2.0 3,577,055 + Ga0059261_3452 0.64 -1.0 3,577,055 + Ga0059261_3452 0.64 -1.1 3,577,055 + Ga0059261_3452 0.64 -2.0 3,577,055 + Ga0059261_3452 0.64 -1.5 3,577,058 + -1.1 3,577,123 + +0.9 3,577,346 + +0.4 3,577,347 - +0.3 3,577,347 - -0.2 3,577,417 + -0.2 3,577,417 + -1.1 3,577,452 + +0.2 3,577,452 + -0.3 3,577,757 + +0.0 3,577,758 - +0.2 3,577,890 + -0.1 3,577,890 + +0.2 3,577,890 + -1.8 3,577,922 - -0.1
Or see this region's nucleotide sequence