Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03824

Experiment: PYE with Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Sisomicin 0.004 mg/ml
3,988,923	-		CCNA_03822	0.85	-0.2
3,988,938	+		CCNA_03822	0.87	+0.8
3,988,950	+		CCNA_03822	0.88	-0.2
3,988,955	+		CCNA_03822	0.89	-1.2
3,988,958	-		CCNA_03822	0.89	-0.3
3,988,980	+				-0.2
3,988,984	-				-0.7
3,989,005	+				+0.2
3,989,033	-				-1.2
3,989,034	-				-0.2
3,989,082	+				+2.8
3,989,121	+				+0.6
3,989,129	-				+0.9
3,989,877	+				+3.2
3,989,887	+				+1.1
3,989,887	+				+1.1
3,989,887	+				+0.2
3,989,887	+				+1.7
3,989,887	+				+0.1
3,989,895	-				-0.7
3,989,905	+				+2.6
3,989,936	+				+5.0
3,989,942	+				+5.0
3,989,950	-				+3.2
3,989,966	-				+3.7
3,990,020	+				+3.8
3,990,036	-				+4.5
3,990,036	-				+0.6
3,990,101	-		CCNA_03824	0.14	+4.6
3,990,119	+		CCNA_03824	0.15	+4.8
3,990,170	+		CCNA_03824	0.18	+2.4
3,990,310	+				+4.1
3,990,316	+		CCNA_03824	0.28	+4.8
3,990,386	+		CCNA_03824	0.32	+4.1
3,990,396	+		CCNA_03824	0.33	+4.9
3,990,461	-		CCNA_03824	0.37	+4.1
3,990,479	+		CCNA_03824	0.39	+4.9
3,990,487	-				+4.2
3,990,539	+		CCNA_03824	0.43	+4.2
3,990,644	+		CCNA_03824	0.50	+4.2
3,990,652	-		CCNA_03824	0.50	+4.4
3,990,746	-		CCNA_03824	0.56	+4.4
3,990,748	+		CCNA_03824	0.56	+4.8
3,990,748	+		CCNA_03824	0.56	+5.5
3,990,756	-		CCNA_03824	0.57	+4.8
3,990,756	-		CCNA_03824	0.57	+3.8
3,990,756	-		CCNA_03824	0.57	+3.9
3,990,819	-				+3.7
3,990,877	-		CCNA_03824	0.65	+3.3
3,990,946	+		CCNA_03824	0.70	+4.5
3,990,963	+		CCNA_03824	0.71	+5.0
3,990,963	+		CCNA_03824	0.71	+5.2
3,991,063	+		CCNA_03824	0.77	+4.5
3,991,071	-		CCNA_03824	0.78	+5.0
3,991,076	-		CCNA_03824	0.78	+4.8
3,991,153	+		CCNA_03824	0.83	+4.8
3,991,155	+		CCNA_03824	0.83	+4.4
3,991,205	-		CCNA_03824	0.87	+4.2
3,991,215	-		CCNA_03824	0.87	+4.3
3,991,318	+				+1.9
3,991,318	+				+0.3
3,991,326	-				+2.2
3,991,326	-				+4.9
3,991,341	+				+0.7
3,991,342	-				+2.1
3,991,394	-				-0.4
3,991,399	-				-0.1
3,991,489	-		CCNA_03825	0.21	-0.5
3,991,515	+		CCNA_03825	0.28	-0.0
3,991,515	+		CCNA_03825	0.28	+1.5
3,991,522	+		CCNA_03825	0.30	-0.0
3,991,552	-		CCNA_03825	0.39	-0.2
3,991,567	+		CCNA_03825	0.43	-0.8
3,991,609	-		CCNA_03825	0.54	+0.5
3,991,611	+		CCNA_03825	0.55	-2.3
3,991,614	-		CCNA_03825	0.56	-0.7
3,991,614	-		CCNA_03825	0.56	-0.5
3,991,619	-		CCNA_03825	0.57	+0.4
3,991,619	-		CCNA_03825	0.57	+1.8
3,991,656	+		CCNA_03825	0.67	-0.8
3,991,664	-		CCNA_03825	0.69	+1.2
3,991,696	+		CCNA_03825	0.78	-1.2
3,991,711	+		CCNA_03825	0.82	-1.4
3,991,711	+		CCNA_03825	0.82	+0.2
3,991,711	+		CCNA_03825	0.82	-0.5
3,991,711	+		CCNA_03825	0.82	-1.0
3,991,711	+		CCNA_03825	0.82	-1.9
3,991,711	+		CCNA_03825	0.82	-0.2
3,991,711	+		CCNA_03825	0.82	-2.1
3,991,711	+		CCNA_03825	0.82	-0.8
3,991,711	+		CCNA_03825	0.82	+0.4
3,991,719	-		CCNA_03825	0.85	+1.5
3,991,719	-		CCNA_03825	0.85	+0.5
3,991,719	-		CCNA_03825	0.85	+0.2
3,991,719	-				+1.8
3,991,719	-		CCNA_03825	0.85	+0.1
3,991,719	-		CCNA_03825	0.85	-1.3
3,991,719	-		CCNA_03825	0.85	-0.1
3,991,719	-		CCNA_03825	0.85	+1.8
3,991,722	+		CCNA_03825	0.85	-2.1
3,991,768	+				-1.1
3,991,775	-				-0.3
3,991,806	-				+1.8
3,991,833	+		CCNA_03826	0.11	+3.1
3,991,847	-		CCNA_03826	0.14	-0.2
3,991,858	+		CCNA_03826	0.16	-1.7
3,991,858	+		CCNA_03826	0.16	+1.8
3,991,858	+		CCNA_03826	0.16	-1.2
3,991,863	+		CCNA_03826	0.17	+1.8
3,991,866	-		CCNA_03826	0.17	+0.4
3,991,868	+		CCNA_03826	0.17	-3.5
3,991,868	+		CCNA_03826	0.17	+0.2
3,991,868	+		CCNA_03826	0.17	+0.1
3,991,871	-		CCNA_03826	0.18	-0.2
3,991,876	-		CCNA_03826	0.19	+0.1
3,991,876	-		CCNA_03826	0.19	-1.4
3,991,915	+		CCNA_03826	0.26	-1.0
3,991,936	+		CCNA_03826	0.30	-0.2
3,992,111	+		CCNA_03826	0.61	-0.3
3,992,119	-		CCNA_03826	0.63	-0.2
3,992,167	-		CCNA_03826	0.71	-1.6
3,992,169	+		CCNA_03826	0.72	-0.8
3,992,246	-		CCNA_03826	0.86	+1.8
3,992,250	+		CCNA_03826	0.86	-0.1
3,992,287	+				-2.0