Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03524

Experiment: PYE with Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Sisomicin 0.004 mg/ml
3,680,143	+				+1.3
3,680,264	-				-1.1
3,680,264	-				-0.2
3,680,323	+				-0.2
3,680,350	+				+0.6
3,680,381	+				+0.9
3,680,381	+				-0.1
3,680,389	-		CCNA_03523	0.11	-0.0
3,680,401	+		CCNA_03523	0.13	-0.3
3,680,409	-		CCNA_03523	0.15	+0.4
3,680,409	-		CCNA_03523	0.15	+0.3
3,680,416	+		CCNA_03523	0.16	+0.1
3,680,416	-		CCNA_03523	0.16	+0.3
3,680,439	+		CCNA_03523	0.21	+0.8
3,680,439	+		CCNA_03523	0.21	-0.9
3,680,447	-		CCNA_03523	0.22	+0.5
3,680,447	-		CCNA_03523	0.22	+0.8
3,680,449	+		CCNA_03523	0.23	-0.3
3,680,454	+		CCNA_03523	0.24	+0.2
3,680,499	+		CCNA_03523	0.33	+0.7
3,680,502	+		CCNA_03523	0.33	+1.1
3,680,517	-		CCNA_03523	0.36	+1.5
3,680,535	+		CCNA_03523	0.40	+1.7
3,680,536	-		CCNA_03523	0.40	-0.7
3,680,536	-		CCNA_03523	0.40	+0.5
3,680,536	-		CCNA_03523	0.40	+0.1
3,680,543	-		CCNA_03523	0.42	-0.7
3,680,543	-		CCNA_03523	0.42	+0.2
3,680,543	-		CCNA_03523	0.42	+0.5
3,680,574	+		CCNA_03523	0.48	+0.0
3,680,624	+		CCNA_03523	0.58	-0.9
3,680,632	-		CCNA_03523	0.59	+0.5
3,680,632	-		CCNA_03523	0.59	+0.5
3,680,657	-		CCNA_03523	0.64	+0.7
3,680,668	-		CCNA_03523	0.67	+1.0
3,680,738	-		CCNA_03523	0.81	-0.1
3,680,738	-		CCNA_03523	0.81	+0.0
3,680,738	-		CCNA_03523	0.81	+0.3
3,680,740	+		CCNA_03523	0.81	+1.8
3,680,743	-		CCNA_03523	0.82	+0.6
3,680,748	-		CCNA_03523	0.83	+2.4
3,680,748	-				+1.8
3,680,748	-		CCNA_03523	0.83	-0.7
3,680,762	-		CCNA_03523	0.86	-0.3
3,680,781	-		CCNA_03523	0.89	-0.0
3,680,792	+				+0.2
3,680,792	+				+0.2
3,680,800	-				+0.7
3,680,894	+				+0.9
3,680,902	-				+1.0
3,680,902	-				-0.0
3,680,902	-				+0.3
3,680,964	+				+1.2
3,680,969	+				+0.4
3,681,042	+				+0.5
3,681,043	-				+1.0
3,681,050	-				+1.1
3,681,050	-				+1.7
3,681,066	-				+1.2
3,681,078	+				+1.5
3,681,085	-				+1.5
3,681,114	-				+1.7
3,681,119	+				+0.5
3,681,127	-				+2.1
3,681,261	-				+4.3
3,681,511	+		CCNA_03524	0.21	+2.5
3,681,558	+		CCNA_03524	0.23	+2.3
3,681,583	+		CCNA_03524	0.25	+2.1
3,681,588	+		CCNA_03524	0.25	+1.5
3,681,613	+		CCNA_03524	0.26	+3.2
3,681,657	-		CCNA_03524	0.28	+2.0
3,681,683	+		CCNA_03524	0.30	+1.4
3,681,717	-		CCNA_03524	0.32	+1.8
3,681,770	+		CCNA_03524	0.35	+2.2
3,681,804	-		CCNA_03524	0.36	+0.8
3,681,860	-		CCNA_03524	0.39	+3.3
3,682,156	-		CCNA_03524	0.55	+3.3
3,682,176	-		CCNA_03524	0.56	+4.0
3,682,213	-		CCNA_03524	0.58	-0.2
3,682,256	+		CCNA_03524	0.60	+1.8
3,682,266	+		CCNA_03524	0.61	+1.2
3,682,301	-		CCNA_03524	0.63	+2.2
3,682,328	+		CCNA_03524	0.64	+2.7
3,682,457	-				+1.2
3,682,460	+		CCNA_03524	0.71	+3.1
3,682,465	+		CCNA_03524	0.71	+1.8
3,682,465	+		CCNA_03524	0.71	+1.1
3,682,468	-		CCNA_03524	0.72	+3.4
3,682,547	-		CCNA_03524	0.76	+2.7
3,682,548	-		CCNA_03524	0.76	+3.2
3,682,579	+		CCNA_03524	0.78	+2.8
3,682,579	+		CCNA_03524	0.78	+2.3
3,682,627	+		CCNA_03524	0.80	+1.8
3,682,636	-		CCNA_03524	0.81	+3.4
3,682,733	-		CCNA_03524	0.86	+2.3
3,682,771	-		CCNA_03524	0.88	+1.6
3,682,794	+		CCNA_03524	0.89	+4.1
3,682,851	-				+2.8
3,682,915	+				+2.8
3,682,969	+				+2.2
3,683,098	+		CCNA_03525	0.25	+1.8
3,683,106	-		CCNA_03525	0.28	+1.8
3,683,166	-		CCNA_03525	0.45	+0.3
3,683,194	-		CCNA_03525	0.54	-0.2
3,683,209	+		CCNA_03525	0.58	-1.9
3,683,214	+		CCNA_03525	0.59	+1.2
3,683,214	+		CCNA_03525	0.59	-0.1
3,683,222	-		CCNA_03525	0.62	+0.8
3,683,237	+		CCNA_03525	0.66	+1.8
3,683,245	-		CCNA_03525	0.68	-1.4
3,683,245	-		CCNA_03525	0.68	+0.2
3,683,258	+		CCNA_03525	0.72	+0.1
3,683,302	+				-1.0
3,683,405	+		CCNA_03526	0.74	-1.2
3,683,410	+		CCNA_03526	0.77	-1.0
3,683,413	-		CCNA_03526	0.79	-1.4
3,683,413	-		CCNA_03526	0.79	+0.7
3,683,415	+		CCNA_03526	0.81	-0.7
3,683,458	+				+0.8
3,683,477	+				-1.5
3,683,477	+				+0.1