Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02788

Experiment: PYE with Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Sisomicin 0.004 mg/ml
2,944,513	+		CCNA_02786	0.70	-0.7
2,944,519	+		CCNA_02786	0.71	+0.0
2,944,521	-		CCNA_02786	0.71	+1.1
2,944,521	-		CCNA_02786	0.71	+0.6
2,944,526	-		CCNA_02786	0.72	+0.6
2,944,527	-		CCNA_02786	0.72	-1.9
2,944,537	-		CCNA_02786	0.73	-0.0
2,944,558	+		CCNA_02786	0.76	-0.3
2,944,600	+		CCNA_02786	0.82	-1.0
2,944,603	-		CCNA_02786	0.83	-0.2
2,944,603	-		CCNA_02786	0.83	-0.2
2,944,603	-		CCNA_02786	0.83	-0.2
2,944,617	+		CCNA_02786	0.85	-1.3
2,944,641	-		CCNA_02786	0.88	+1.1
2,944,644	-		CCNA_02786	0.89	-1.0
2,944,703	+				-3.3
2,944,713	+				-1.0
2,944,713	+				+0.6
2,944,713	+				-2.6
2,944,721	-				-0.2
2,944,721	-				+0.6
2,944,721	-				+1.1
2,944,721	-				+0.6
2,944,749	+				+0.6
2,944,750	+				+2.1
2,944,751	+				-0.2
2,944,784	+				+1.1
2,944,816	+		CCNA_02787	0.16	-1.4
2,944,825	-		CCNA_02787	0.17	+0.6
2,944,847	-		CCNA_02787	0.22	+3.1
2,944,847	-		CCNA_02787	0.22	-0.7
2,944,847	-		CCNA_02787	0.22	-0.9
2,944,849	+		CCNA_02787	0.22	-0.4
2,944,870	-		CCNA_02787	0.26	-2.3
2,944,893	+		CCNA_02787	0.31	+0.1
2,944,893	+		CCNA_02787	0.31	+0.1
2,944,895	+		CCNA_02787	0.31	-1.2
2,944,895	+		CCNA_02787	0.31	+0.1
2,944,901	-		CCNA_02787	0.32	-0.2
2,944,910	+		CCNA_02787	0.34	-1.4
2,944,910	+		CCNA_02787	0.34	+0.6
2,944,910	+		CCNA_02787	0.34	-0.8
2,944,951	+		CCNA_02787	0.42	-1.2
2,944,988	+		CCNA_02787	0.49	-2.4
2,944,993	-		CCNA_02787	0.50	-1.1
2,945,024	+		CCNA_02787	0.56	-1.0
2,945,027	-		CCNA_02787	0.57	-1.7
2,945,095	-		CCNA_02787	0.70	-1.0
2,945,095	-		CCNA_02787	0.70	-3.3
2,945,128	+		CCNA_02787	0.77	+1.1
2,945,136	-		CCNA_02787	0.78	-0.4
2,945,136	-		CCNA_02787	0.78	-1.3
2,945,139	+		CCNA_02787	0.79	+0.6
2,945,139	+		CCNA_02787	0.79	-1.8
2,945,141	-		CCNA_02787	0.79	+0.1
2,945,161	-		CCNA_02787	0.83	+1.1
2,945,182	-		CCNA_02787	0.87	+1.4
2,945,187	+		CCNA_02787	0.88	+1.1
2,945,197	+				-1.7
2,945,197	+				-1.2
2,945,197	+				-0.6
2,945,234	+				+1.1
2,945,238	+				-0.3
2,945,238	+				+1.1
2,945,238	+				-0.6
2,945,240	-				+1.1
2,945,246	-				-0.9
2,945,254	+				+0.3
2,945,285	+				-1.3
2,945,294	+				-0.9
2,945,296	+				+2.1
2,945,339	-				-0.2
2,945,352	+				-0.9
2,945,360	-				-0.2
2,945,362	+				+2.7
2,945,370	-				+1.3
2,945,370	-				-1.2
2,945,405	+				-0.4
2,945,405	+				+0.1
2,945,413	-				+0.6
2,945,532	-		CCNA_02788	0.11	+0.6
2,945,537	-		CCNA_02788	0.13	+0.1
2,945,537	-		CCNA_02788	0.13	-0.4
2,945,560	-		CCNA_02788	0.23	+0.6
2,945,574	-		CCNA_02788	0.29	-1.3
2,945,628	-		CCNA_02788	0.53	+0.1
2,945,725	-				+0.2
2,945,795	+				-0.9
2,945,803	-				+0.8
2,945,807	+				-1.4
2,945,807	+				+0.6
2,945,815	-				+1.2
2,945,815	-				+0.3
2,945,815	-				+0.5
2,945,815	-				+1.2
2,945,815	-				+2.1
2,945,815	-				+0.7
2,945,885	-		CCNA_02789	0.34	+0.1
2,945,918	+		CCNA_02789	0.50	-0.9
2,945,918	+		CCNA_02789	0.50	-0.4
2,945,937	+		CCNA_02789	0.59	-0.7
2,945,950	+		CCNA_02789	0.65	+0.3
2,946,026	+				-0.4
2,946,034	-				-1.4
2,946,051	+				-0.0
2,946,052	-				+0.6
2,946,052	-				-1.4
2,946,101	+				-1.7
2,946,114	-				-1.9
2,946,126	-				+0.1
2,946,144	-				+0.6
2,946,147	+				+1.5
2,946,207	-				-1.4
2,946,222	-		CCNA_02790	0.13	+0.6
2,946,291	-		CCNA_02790	0.26	+1.3
2,946,311	+		CCNA_02790	0.30	-0.7
2,946,311	+		CCNA_02790	0.30	-0.6
2,946,311	+		CCNA_02790	0.30	-0.9
2,946,324	+		CCNA_02790	0.32	-0.4
2,946,331	+		CCNA_02790	0.33	+0.8
2,946,332	+		CCNA_02790	0.34	-0.2
2,946,339	+		CCNA_02790	0.35	-0.7
2,946,357	-		CCNA_02790	0.38	+2.7
2,946,366	+		CCNA_02790	0.40	+0.6
2,946,374	-		CCNA_02790	0.41	-0.2
2,946,374	-		CCNA_02790	0.41	-0.2
2,946,381	-		CCNA_02790	0.43	+0.7
2,946,392	+		CCNA_02790	0.45	-1.2
2,946,392	+		CCNA_02790	0.45	-1.6
2,946,392	+		CCNA_02790	0.45	-1.4
2,946,392	+		CCNA_02790	0.45	-0.9
2,946,392	+		CCNA_02790	0.45	-0.0
2,946,392	+		CCNA_02790	0.45	+1.1
2,946,392	+		CCNA_02790	0.45	-0.7
2,946,393	+		CCNA_02790	0.45	+1.1
2,946,400	-		CCNA_02790	0.46	-1.4
2,946,400	-		CCNA_02790	0.46	+0.6
2,946,400	-		CCNA_02790	0.46	+0.7
2,946,400	-		CCNA_02790	0.46	+2.0
2,946,400	-		CCNA_02790	0.46	-0.2
2,946,400	-		CCNA_02790	0.46	-2.1
2,946,400	-		CCNA_02790	0.46	-1.7
2,946,407	-		CCNA_02790	0.48	+0.6
2,946,488	+		CCNA_02790	0.63	-0.8
2,946,517	+		CCNA_02790	0.69	-0.8
2,946,551	+		CCNA_02790	0.75	+2.7
2,946,551	+		CCNA_02790	0.75	+1.7
2,946,570	-		CCNA_02790	0.79	+0.1
2,946,575	+		CCNA_02790	0.80	+1.0
2,946,575	+		CCNA_02790	0.80	-0.2
2,946,594	+		CCNA_02790	0.83	-0.4
2,946,626	+		CCNA_02790	0.89	+0.6
2,946,641	+				-1.4
2,946,649	-				+2.1
2,946,671	+				-1.2
2,946,671	+				-0.7
2,946,679	-				-0.1
2,946,680	-				-0.6
2,946,699	-				+1.1
2,946,709	+				+0.5
2,946,709	+				+1.1
2,946,709	+				-1.4
2,946,717	-				+2.7
2,946,717	-				+0.9
2,946,717	-				-0.4