Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02224

Experiment: PYE with Sisomicin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Sisomicin 0.004 mg/ml
2,371,755	+		CCNA_02222	0.89	+1.8
2,371,763	-		CCNA_02222	0.89	-1.7
2,371,827	-				+0.3
2,371,838	-				+2.2
2,371,840	-				-0.3
2,371,915	+				-1.2
2,371,937	+				-2.2
2,372,003	-		CCNA_02223	0.15	-0.4
2,372,009	+		CCNA_02223	0.16	-1.7
2,372,020	+		CCNA_02223	0.17	-0.6
2,372,028	-		CCNA_02223	0.18	+0.2
2,372,051	-		CCNA_02223	0.20	-0.6
2,372,063	+		CCNA_02223	0.22	-1.1
2,372,071	-		CCNA_02223	0.23	+0.2
2,372,078	+		CCNA_02223	0.24	-0.1
2,372,117	-		CCNA_02223	0.28	+0.8
2,372,123	+		CCNA_02223	0.29	+1.2
2,372,177	+		CCNA_02223	0.35	+0.5
2,372,177	+		CCNA_02223	0.35	-0.8
2,372,210	-		CCNA_02223	0.39	+0.9
2,372,211	-		CCNA_02223	0.39	+3.2
2,372,225	+		CCNA_02223	0.40	-0.7
2,372,276	-		CCNA_02223	0.46	+0.0
2,372,276	-		CCNA_02223	0.46	-0.1
2,372,276	-		CCNA_02223	0.46	+0.9
2,372,276	-		CCNA_02223	0.46	+0.5
2,372,276	-		CCNA_02223	0.46	+0.5
2,372,276	-		CCNA_02223	0.46	+0.7
2,372,281	-		CCNA_02223	0.47	-0.1
2,372,281	-		CCNA_02223	0.47	+1.3
2,372,296	-		CCNA_02223	0.49	+0.2
2,372,390	+		CCNA_02223	0.59	-0.8
2,372,390	+		CCNA_02223	0.59	-0.6
2,372,405	-		CCNA_02223	0.61	-0.6
2,372,407	+		CCNA_02223	0.61	-1.9
2,372,414	+		CCNA_02223	0.62	-0.6
2,372,414	+		CCNA_02223	0.62	-1.4
2,372,422	-		CCNA_02223	0.63	+1.7
2,372,422	-		CCNA_02223	0.63	+0.8
2,372,422	-		CCNA_02223	0.63	+0.8
2,372,422	-		CCNA_02223	0.63	+0.5
2,372,472	-		CCNA_02223	0.69	+0.4
2,372,501	+		CCNA_02223	0.72	-1.1
2,372,502	-		CCNA_02223	0.72	+0.1
2,372,559	-		CCNA_02223	0.79	-1.0
2,372,564	-		CCNA_02223	0.79	+0.2
2,372,606	+		CCNA_02223	0.84	-1.6
2,372,615	+		CCNA_02223	0.85	-1.4
2,372,636	+		CCNA_02223	0.88	+0.8
2,372,636	+		CCNA_02223	0.88	-1.8
2,372,644	-		CCNA_02223	0.89	-0.4
2,372,690	+				-0.7
2,372,735	-				+0.4
2,372,750	+				-1.1
2,372,750	+				-0.2
2,372,771	-				+0.7
2,372,780	+				-0.2
2,372,781	+				-0.6
2,372,786	+				-0.4
2,372,794	-				-2.1
2,372,820	+				-1.0
2,372,827	-				+0.5
2,372,833	+				-1.6
2,372,853	-		CCNA_02224	0.12	+1.1
2,372,991	+		CCNA_02224	0.27	-0.2
2,373,024	-		CCNA_02224	0.30	+0.8
2,373,097	+		CCNA_02224	0.38	-2.5
2,373,196	+		CCNA_02224	0.48	+0.2
2,373,199	-		CCNA_02224	0.49	+0.8
2,373,199	-		CCNA_02224	0.49	+0.8
2,373,202	+		CCNA_02224	0.49	+0.8
2,373,202	+		CCNA_02224	0.49	+0.5
2,373,210	-		CCNA_02224	0.50	+0.8
2,373,214	+		CCNA_02224	0.50	-1.8
2,373,224	+		CCNA_02224	0.51	+0.2
2,373,241	+		CCNA_02224	0.53	-1.1
2,373,241	+		CCNA_02224	0.53	+0.8
2,373,249	-		CCNA_02224	0.54	+0.5
2,373,249	-		CCNA_02224	0.54	+0.6
2,373,254	-		CCNA_02224	0.54	+0.7
2,373,272	-		CCNA_02224	0.56	+2.6
2,373,273	-		CCNA_02224	0.57	+0.4
2,373,284	+		CCNA_02224	0.58	-1.7
2,373,414	+		CCNA_02224	0.71	-0.2
2,373,414	+		CCNA_02224	0.71	-1.2
2,373,422	-		CCNA_02224	0.72	+0.1
2,373,422	-		CCNA_02224	0.72	-0.5
2,373,439	-		CCNA_02224	0.74	+0.4
2,373,450	-		CCNA_02224	0.75	+0.8
2,373,500	+		CCNA_02224	0.81	-0.2
2,373,500	+		CCNA_02224	0.81	+0.2
2,373,508	-		CCNA_02224	0.81	-0.4
2,373,508	-		CCNA_02224	0.81	+0.3
2,373,508	-		CCNA_02224	0.81	-0.7
2,373,508	-		CCNA_02224	0.81	+0.6
2,373,510	-		CCNA_02224	0.82	+0.4
2,373,539	+		CCNA_02224	0.85	+0.3
2,373,543	+		CCNA_02224	0.85	-0.2
2,373,575	-		CCNA_02224	0.88	-0.5
2,373,583	+		CCNA_02224	0.89	-1.2
2,373,583	+		CCNA_02224	0.89	-0.2
2,373,583	+		CCNA_02224	0.89	-0.6
2,373,591	-				+1.1
2,373,667	-				+1.0
2,373,671	+				-0.8
2,373,692	+				-0.2
2,373,694	+				+0.4
2,373,700	-				+0.5
2,373,700	-				+0.9
2,373,734	-				+1.1
2,373,734	-				+0.9
2,373,787	+		CCNA_02225	0.11	-1.6
2,373,818	+		CCNA_02225	0.14	-0.2
2,373,856	-		CCNA_02225	0.18	+1.9
2,373,944	-		CCNA_02225	0.27	+0.5
2,373,971	+		CCNA_02225	0.30	-0.2
2,373,995	-		CCNA_02225	0.32	+0.2
2,374,100	-		CCNA_02225	0.43	+3.6
2,374,122	-		CCNA_02225	0.45	+1.1
2,374,249	+		CCNA_02225	0.58	+0.2
2,374,257	-		CCNA_02225	0.59	+1.2
2,374,299	+		CCNA_02225	0.63	+1.8
2,374,307	-		CCNA_02225	0.64	+1.0
2,374,317	+		CCNA_02225	0.65	-1.2
2,374,324	-		CCNA_02225	0.66	+1.8
2,374,353	+		CCNA_02225	0.69	+0.8
2,374,458	-		CCNA_02225	0.80	+0.9
2,374,458	-		CCNA_02225	0.80	+1.4
2,374,458	-		CCNA_02225	0.80	+0.9
2,374,458	-		CCNA_02225	0.80	+1.6
2,374,499	-		CCNA_02225	0.84	+1.9
2,374,539	-		CCNA_02225	0.88	+1.2
2,374,558	-		CCNA_02225	0.90	+1.2