Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS31755

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS31750 and AZOBR_RS31755 are separated by 362 nucleotides AZOBR_RS31750: AZOBR_RS31750 - hypothetical protein, at 491,002 to 492,321 _RS31750 AZOBR_RS31755: AZOBR_RS31755 - hypothetical protein, at 492,684 to 492,923 _RS31755 Position (kb) 492 493Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 491.786 kb on - strand, within AZOBR_RS31750at 492.035 kb on + strand, within AZOBR_RS31750at 492.036 kb on - strand, within AZOBR_RS31750at 492.036 kb on - strand, within AZOBR_RS31750at 492.036 kb on - strand, within AZOBR_RS31750at 492.720 kb on + strand, within AZOBR_RS31755at 492.720 kb on + strand, within AZOBR_RS31755at 492.721 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.763 kb on - strand, within AZOBR_RS31755at 492.774 kb on + strand, within AZOBR_RS31755at 492.775 kb on - strand, within AZOBR_RS31755at 493.088 kb on + strandat 493.368 kb on - strandat 493.808 kb on + strandat 493.808 kb on + strandat 493.808 kb on + strandat 493.809 kb on - strandat 493.809 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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491,786 - AZOBR_RS31750 0.59 +0.0
492,035 + AZOBR_RS31750 0.78 +0.4
492,036 - AZOBR_RS31750 0.78 +0.6
492,036 - AZOBR_RS31750 0.78 -0.4
492,036 - AZOBR_RS31750 0.78 +0.5
492,720 + AZOBR_RS31755 0.15 +0.4
492,720 + AZOBR_RS31755 0.15 -0.4
492,721 - AZOBR_RS31755 0.15 +0.4
492,763 - AZOBR_RS31755 0.33 -3.8
492,763 - AZOBR_RS31755 0.33 -0.2
492,763 - AZOBR_RS31755 0.33 -1.2
492,763 - AZOBR_RS31755 0.33 -0.2
492,763 - AZOBR_RS31755 0.33 -2.1
492,763 - AZOBR_RS31755 0.33 -0.6
492,763 - AZOBR_RS31755 0.33 -1.6
492,774 + AZOBR_RS31755 0.38 +2.1
492,775 - AZOBR_RS31755 0.38 +0.0
493,088 + -1.2
493,368 - -0.9
493,808 + +0.7
493,808 + -0.7
493,808 + -0.2
493,809 - +1.2
493,809 - -0.7

Or see this region's nucleotide sequence