Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31370 and AZOBR_RS31375 are separated by 71 nucleotides AZOBR_RS31375 and AZOBR_RS31380 are separated by 21 nucleotides
AZOBR_RS31370: AZOBR_RS31370 - mannonate dehydratase, at 405,065 to 406,261
_RS31370
AZOBR_RS31375: AZOBR_RS31375 - dioxygenase, at 406,333 to 407,814
_RS31375
AZOBR_RS31380: AZOBR_RS31380 - transcriptional regulator, at 407,836 to 408,531
_RS31380
Position (kb) 406
407
408 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 405.655 kb on - strand, within AZOBR_RS31370 at 405.655 kb on - strand, within AZOBR_RS31370 at 405.948 kb on + strand, within AZOBR_RS31370 at 405.948 kb on + strand, within AZOBR_RS31370 at 405.949 kb on - strand, within AZOBR_RS31370 at 405.949 kb on - strand, within AZOBR_RS31370 at 405.949 kb on - strand, within AZOBR_RS31370 at 405.999 kb on + strand, within AZOBR_RS31370 at 406.000 kb on - strand, within AZOBR_RS31370 at 406.589 kb on + strand, within AZOBR_RS31375 at 406.589 kb on + strand, within AZOBR_RS31375 at 406.766 kb on + strand, within AZOBR_RS31375 at 406.766 kb on + strand, within AZOBR_RS31375 at 406.767 kb on - strand, within AZOBR_RS31375 at 406.767 kb on - strand, within AZOBR_RS31375 at 406.905 kb on - strand, within AZOBR_RS31375 at 406.955 kb on + strand, within AZOBR_RS31375 at 406.956 kb on - strand, within AZOBR_RS31375 at 407.420 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.574 kb on + strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.575 kb on - strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.576 kb on + strand, within AZOBR_RS31375 at 407.577 kb on - strand, within AZOBR_RS31375 at 407.681 kb on + strand at 407.681 kb on + strand at 407.682 kb on - strand at 407.756 kb on + strand at 407.756 kb on + strand at 407.756 kb on + strand at 407.828 kb on + strand at 407.829 kb on - strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.837 kb on + strand at 407.838 kb on - strand at 407.838 kb on - strand at 407.838 kb on - strand at 407.838 kb on - strand at 408.467 kb on + strand at 408.468 kb on - strand at 408.555 kb on + strand at 408.558 kb on + strand at 408.558 kb on + strand at 408.559 kb on - strand at 408.725 kb on + strand at 408.728 kb on + strand at 408.729 kb on - strand at 408.791 kb on - strand at 408.814 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 405,655 - AZOBR_RS31370 0.49 -2.5 405,655 - AZOBR_RS31370 0.49 -0.3 405,948 + AZOBR_RS31370 0.74 -2.8 405,948 + AZOBR_RS31370 0.74 -0.0 405,949 - AZOBR_RS31370 0.74 -1.0 405,949 - AZOBR_RS31370 0.74 -0.3 405,949 - AZOBR_RS31370 0.74 -0.8 405,999 + AZOBR_RS31370 0.78 -4.0 406,000 - AZOBR_RS31370 0.78 +1.1 406,589 + AZOBR_RS31375 0.17 +0.9 406,589 + AZOBR_RS31375 0.17 +1.1 406,766 + AZOBR_RS31375 0.29 -2.2 406,766 + AZOBR_RS31375 0.29 -0.5 406,767 - AZOBR_RS31375 0.29 +1.0 406,767 - AZOBR_RS31375 0.29 -0.9 406,905 - AZOBR_RS31375 0.39 -1.6 406,955 + AZOBR_RS31375 0.42 -1.6 406,956 - AZOBR_RS31375 0.42 +0.3 407,420 + AZOBR_RS31375 0.73 -0.8 407,574 + AZOBR_RS31375 0.84 +0.3 407,574 + AZOBR_RS31375 0.84 +0.0 407,574 + AZOBR_RS31375 0.84 -1.4 407,574 + AZOBR_RS31375 0.84 +0.6 407,575 - AZOBR_RS31375 0.84 +0.3 407,575 - AZOBR_RS31375 0.84 +1.8 407,575 - AZOBR_RS31375 0.84 +0.2 407,575 - AZOBR_RS31375 0.84 +0.2 407,576 + AZOBR_RS31375 0.84 -0.3 407,576 + AZOBR_RS31375 0.84 +0.9 407,576 + AZOBR_RS31375 0.84 +0.1 407,577 - AZOBR_RS31375 0.84 +0.3 407,681 + -2.9 407,681 + +1.5 407,682 - -0.1 407,756 + -0.1 407,756 + +0.1 407,756 + +0.1 407,828 + -0.8 407,829 - -0.6 407,837 + -0.6 407,837 + +0.1 407,837 + -0.4 407,837 + -0.1 407,837 + -2.9 407,837 + -1.7 407,837 + -0.1 407,838 - -2.0 407,838 - +1.5 407,838 - -0.7 407,838 - -3.2 408,467 + +0.4 408,468 - -0.6 408,555 + -0.5 408,558 + +1.2 408,558 + -1.3 408,559 - +0.6 408,725 + -0.0 408,728 + -1.4 408,729 - -0.4 408,791 - +0.9 408,814 + +2.1
Or see this region's nucleotide sequence