Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30835 and AZOBR_RS30840 are separated by 25 nucleotides
AZOBR_RS30835: AZOBR_RS30835 - PTS fructose transporter subunit IIBC, at 282,037 to 283,791
_RS30835
AZOBR_RS30840: AZOBR_RS30840 - hypothetical protein, at 283,817 to 284,788
_RS30840
Position (kb) 282
283
284 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 281.769 kb on + strand at 282.104 kb on + strand at 282.104 kb on + strand at 282.105 kb on - strand at 282.105 kb on - strand at 282.105 kb on - strand at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.423 kb on - strand, within AZOBR_RS30835 at 282.423 kb on - strand, within AZOBR_RS30835 at 282.458 kb on + strand, within AZOBR_RS30835 at 282.458 kb on + strand, within AZOBR_RS30835 at 282.458 kb on + strand, within AZOBR_RS30835 at 282.459 kb on - strand, within AZOBR_RS30835 at 282.605 kb on + strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.830 kb on + strand, within AZOBR_RS30835 at 282.831 kb on - strand, within AZOBR_RS30835 at 282.839 kb on + strand, within AZOBR_RS30835 at 283.818 kb on + strand at 284.304 kb on + strand, within AZOBR_RS30840 at 284.304 kb on + strand, within AZOBR_RS30840
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 281,769 + +0.0 282,104 + -0.2 282,104 + -0.2 282,105 - -0.9 282,105 - -1.6 282,105 - -1.0 282,422 + AZOBR_RS30835 0.22 -0.0 282,422 + AZOBR_RS30835 0.22 -0.3 282,422 + AZOBR_RS30835 0.22 -0.1 282,422 + AZOBR_RS30835 0.22 +1.6 282,422 + AZOBR_RS30835 0.22 +2.7 282,423 - AZOBR_RS30835 0.22 -0.6 282,423 - AZOBR_RS30835 0.22 -2.3 282,458 + AZOBR_RS30835 0.24 -2.9 282,458 + AZOBR_RS30835 0.24 +0.2 282,458 + AZOBR_RS30835 0.24 +0.1 282,459 - AZOBR_RS30835 0.24 +0.5 282,605 + AZOBR_RS30835 0.32 -2.8 282,606 - AZOBR_RS30835 0.32 -0.5 282,606 - AZOBR_RS30835 0.32 -0.0 282,606 - AZOBR_RS30835 0.32 +0.2 282,606 - AZOBR_RS30835 0.32 +0.1 282,720 - AZOBR_RS30835 0.39 -0.7 282,720 - AZOBR_RS30835 0.39 +0.5 282,720 - AZOBR_RS30835 0.39 -1.8 282,720 - AZOBR_RS30835 0.39 -0.2 282,830 + AZOBR_RS30835 0.45 +1.5 282,831 - AZOBR_RS30835 0.45 +0.8 282,839 + AZOBR_RS30835 0.46 -0.4 283,818 + +1.3 284,304 + AZOBR_RS30840 0.50 -1.8 284,304 + AZOBR_RS30840 0.50 -1.4
Or see this region's nucleotide sequence