Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29835 and AZOBR_RS29840 are separated by 1 nucleotides AZOBR_RS29840 and AZOBR_RS29845 are separated by 287 nucleotides
AZOBR_RS29835: AZOBR_RS29835 - sulfite oxidase, at 41,202 to 41,843
_RS29835
AZOBR_RS29840: AZOBR_RS29840 - sulfoxide reductase catalytic subunit YedY, at 41,845 to 42,792
_RS29840
AZOBR_RS29845: AZOBR_RS29845 - oxidoreductase, at 43,080 to 44,108
_RS29845
Position (kb) 41
42
43 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 41.249 kb on + strand at 41.249 kb on + strand at 41.250 kb on - strand at 41.329 kb on + strand, within AZOBR_RS29835 at 41.329 kb on + strand, within AZOBR_RS29835 at 41.330 kb on - strand, within AZOBR_RS29835 at 41.330 kb on - strand, within AZOBR_RS29835 at 41.330 kb on - strand, within AZOBR_RS29835 at 41.330 kb on - strand, within AZOBR_RS29835 at 41.330 kb on - strand, within AZOBR_RS29835 at 41.476 kb on + strand, within AZOBR_RS29835 at 41.477 kb on - strand, within AZOBR_RS29835 at 41.539 kb on + strand, within AZOBR_RS29835 at 41.540 kb on - strand, within AZOBR_RS29835 at 41.540 kb on - strand, within AZOBR_RS29835 at 41.563 kb on + strand, within AZOBR_RS29835 at 41.563 kb on + strand, within AZOBR_RS29835 at 41.849 kb on + strand at 41.849 kb on + strand at 41.876 kb on + strand at 42.002 kb on + strand, within AZOBR_RS29840 at 42.002 kb on + strand, within AZOBR_RS29840 at 42.012 kb on - strand, within AZOBR_RS29840 at 42.102 kb on - strand, within AZOBR_RS29840 at 42.102 kb on - strand, within AZOBR_RS29840 at 42.161 kb on + strand, within AZOBR_RS29840 at 42.161 kb on + strand, within AZOBR_RS29840 at 42.161 kb on + strand, within AZOBR_RS29840 at 42.161 kb on + strand, within AZOBR_RS29840 at 42.161 kb on + strand, within AZOBR_RS29840 at 42.296 kb on + strand, within AZOBR_RS29840 at 42.296 kb on + strand, within AZOBR_RS29840 at 42.296 kb on + strand, within AZOBR_RS29840 at 42.297 kb on - strand, within AZOBR_RS29840 at 42.297 kb on - strand, within AZOBR_RS29840 at 42.297 kb on - strand, within AZOBR_RS29840 at 42.399 kb on - strand, within AZOBR_RS29840 at 42.848 kb on + strand at 42.848 kb on + strand at 42.849 kb on - strand at 42.849 kb on - strand at 43.072 kb on + strand at 43.072 kb on + strand at 43.072 kb on + strand at 43.072 kb on + strand at 43.073 kb on - strand at 43.073 kb on - strand at 43.546 kb on + strand, within AZOBR_RS29845 at 43.546 kb on + strand, within AZOBR_RS29845 at 43.547 kb on - strand, within AZOBR_RS29845 at 43.547 kb on - strand, within AZOBR_RS29845 at 43.547 kb on - strand, within AZOBR_RS29845 at 43.547 kb on - strand, within AZOBR_RS29845 at 43.627 kb on + strand, within AZOBR_RS29845 at 43.627 kb on + strand, within AZOBR_RS29845 at 43.628 kb on - strand, within AZOBR_RS29845 at 43.628 kb on - strand, within AZOBR_RS29845 at 43.630 kb on + strand, within AZOBR_RS29845 at 43.630 kb on + strand, within AZOBR_RS29845 at 43.631 kb on - strand, within AZOBR_RS29845 at 43.631 kb on - strand, within AZOBR_RS29845 at 43.631 kb on - strand, within AZOBR_RS29845
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 41,249 + -2.7 41,249 + +0.1 41,250 - -0.7 41,329 + AZOBR_RS29835 0.20 +0.8 41,329 + AZOBR_RS29835 0.20 +0.9 41,330 - AZOBR_RS29835 0.20 -1.5 41,330 - AZOBR_RS29835 0.20 -0.2 41,330 - AZOBR_RS29835 0.20 -0.4 41,330 - AZOBR_RS29835 0.20 -0.4 41,330 - AZOBR_RS29835 0.20 +0.4 41,476 + AZOBR_RS29835 0.43 -0.5 41,477 - AZOBR_RS29835 0.43 -0.0 41,539 + AZOBR_RS29835 0.52 +0.5 41,540 - AZOBR_RS29835 0.53 -0.7 41,540 - AZOBR_RS29835 0.53 +0.7 41,563 + AZOBR_RS29835 0.56 +0.4 41,563 + AZOBR_RS29835 0.56 -1.3 41,849 + -1.3 41,849 + -0.4 41,876 + +0.3 42,002 + AZOBR_RS29840 0.17 -1.1 42,002 + AZOBR_RS29840 0.17 -2.1 42,012 - AZOBR_RS29840 0.18 +0.7 42,102 - AZOBR_RS29840 0.27 +0.3 42,102 - AZOBR_RS29840 0.27 -1.9 42,161 + AZOBR_RS29840 0.33 -0.2 42,161 + AZOBR_RS29840 0.33 +2.0 42,161 + AZOBR_RS29840 0.33 -0.3 42,161 + AZOBR_RS29840 0.33 -0.0 42,161 + AZOBR_RS29840 0.33 +0.6 42,296 + AZOBR_RS29840 0.48 +0.2 42,296 + AZOBR_RS29840 0.48 +0.3 42,296 + AZOBR_RS29840 0.48 -3.1 42,297 - AZOBR_RS29840 0.48 -1.0 42,297 - AZOBR_RS29840 0.48 +0.5 42,297 - AZOBR_RS29840 0.48 -0.4 42,399 - AZOBR_RS29840 0.58 -1.2 42,848 + +0.2 42,848 + -2.1 42,849 - -1.3 42,849 - +0.3 43,072 + +0.1 43,072 + -0.9 43,072 + -1.4 43,072 + +0.4 43,073 - -0.7 43,073 - +3.4 43,546 + AZOBR_RS29845 0.45 +0.4 43,546 + AZOBR_RS29845 0.45 -1.1 43,547 - AZOBR_RS29845 0.45 -0.2 43,547 - AZOBR_RS29845 0.45 +0.7 43,547 - AZOBR_RS29845 0.45 +1.1 43,547 - AZOBR_RS29845 0.45 -1.6 43,627 + AZOBR_RS29845 0.53 -0.2 43,627 + AZOBR_RS29845 0.53 -0.1 43,628 - AZOBR_RS29845 0.53 +0.1 43,628 - AZOBR_RS29845 0.53 -0.4 43,630 + AZOBR_RS29845 0.53 -0.3 43,630 + AZOBR_RS29845 0.53 -0.6 43,631 - AZOBR_RS29845 0.54 -0.1 43,631 - AZOBR_RS29845 0.54 -2.7 43,631 - AZOBR_RS29845 0.54 -0.5
Or see this region's nucleotide sequence