Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27900 and AZOBR_RS27905 are separated by 47 nucleotides AZOBR_RS27905 and AZOBR_RS27910 are separated by 112 nucleotides
AZOBR_RS27900: AZOBR_RS27900 - FAD-binding oxidoreductase, at 428,448 to 430,520
_RS27900
AZOBR_RS27905: AZOBR_RS27905 - 50S ribosomal protein L21, at 430,568 to 431,032
_RS27905
AZOBR_RS27910: AZOBR_RS27910 - LysR family transcriptional regulator, at 431,145 to 432,035
_RS27910
Position (kb) 430
431
432 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 429.606 kb on + strand, within AZOBR_RS27900 at 429.607 kb on - strand, within AZOBR_RS27900 at 429.607 kb on - strand, within AZOBR_RS27900 at 429.639 kb on + strand, within AZOBR_RS27900 at 430.005 kb on + strand, within AZOBR_RS27900 at 430.005 kb on + strand, within AZOBR_RS27900 at 430.005 kb on + strand, within AZOBR_RS27900 at 430.074 kb on + strand, within AZOBR_RS27900 at 430.075 kb on - strand, within AZOBR_RS27900 at 430.110 kb on + strand, within AZOBR_RS27900 at 430.111 kb on - strand, within AZOBR_RS27900 at 430.410 kb on + strand at 430.410 kb on + strand at 430.411 kb on - strand at 430.411 kb on - strand at 430.411 kb on - strand at 430.677 kb on - strand, within AZOBR_RS27905 at 430.775 kb on + strand, within AZOBR_RS27905 at 430.835 kb on + strand, within AZOBR_RS27905 at 430.836 kb on - strand, within AZOBR_RS27905 at 430.842 kb on - strand, within AZOBR_RS27905 at 431.088 kb on - strand at 431.403 kb on + strand, within AZOBR_RS27910 at 431.403 kb on + strand, within AZOBR_RS27910 at 431.403 kb on + strand, within AZOBR_RS27910 at 431.656 kb on - strand, within AZOBR_RS27910 at 431.656 kb on - strand, within AZOBR_RS27910
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 429,606 + AZOBR_RS27900 0.56 +0.3 429,607 - AZOBR_RS27900 0.56 +0.1 429,607 - AZOBR_RS27900 0.56 +0.7 429,639 + AZOBR_RS27900 0.57 -3.3 430,005 + AZOBR_RS27900 0.75 -0.4 430,005 + AZOBR_RS27900 0.75 +0.3 430,005 + AZOBR_RS27900 0.75 -0.7 430,074 + AZOBR_RS27900 0.78 -1.1 430,075 - AZOBR_RS27900 0.78 -0.3 430,110 + AZOBR_RS27900 0.80 +0.8 430,111 - AZOBR_RS27900 0.80 -1.2 430,410 + -1.0 430,410 + +0.3 430,411 - -0.1 430,411 - +1.8 430,411 - -0.3 430,677 - AZOBR_RS27905 0.23 -0.4 430,775 + AZOBR_RS27905 0.45 +2.6 430,835 + AZOBR_RS27905 0.57 +0.8 430,836 - AZOBR_RS27905 0.58 -1.5 430,842 - AZOBR_RS27905 0.59 -0.2 431,088 - -1.5 431,403 + AZOBR_RS27910 0.29 +1.5 431,403 + AZOBR_RS27910 0.29 +0.6 431,403 + AZOBR_RS27910 0.29 -0.5 431,656 - AZOBR_RS27910 0.57 -0.1 431,656 - AZOBR_RS27910 0.57 -1.1
Or see this region's nucleotide sequence