Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27575 and AZOBR_RS27580 are separated by 15 nucleotides AZOBR_RS27580 and AZOBR_RS27585 are separated by 40 nucleotides
AZOBR_RS27575: AZOBR_RS27575 - arsenic resistance protein, at 347,617 to 348,579
_RS27575
AZOBR_RS27580: AZOBR_RS27580 - oxidoreductase, at 348,595 to 349,296
_RS27580
AZOBR_RS27585: AZOBR_RS27585 - ABC transporter substrate-binding protein, at 349,337 to 350,422
_RS27585
Position (kb) 348
349
350 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 347.761 kb on + strand, within AZOBR_RS27575 at 347.762 kb on - strand, within AZOBR_RS27575 at 347.956 kb on + strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 347.957 kb on - strand, within AZOBR_RS27575 at 348.056 kb on - strand, within AZOBR_RS27575 at 348.325 kb on + strand, within AZOBR_RS27575 at 348.541 kb on + strand at 348.541 kb on + strand at 348.542 kb on - strand at 348.542 kb on - strand at 349.347 kb on + strand at 349.347 kb on + strand at 349.347 kb on + strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.348 kb on - strand at 349.416 kb on + strand at 349.416 kb on + strand at 349.828 kb on - strand, within AZOBR_RS27585 at 349.828 kb on - strand, within AZOBR_RS27585 at 350.014 kb on - strand, within AZOBR_RS27585 at 350.058 kb on + strand, within AZOBR_RS27585 at 350.064 kb on + strand, within AZOBR_RS27585 at 350.064 kb on + strand at 350.070 kb on + strand, within AZOBR_RS27585 at 350.077 kb on - strand, within AZOBR_RS27585 at 350.077 kb on - strand, within AZOBR_RS27585 at 350.238 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 347,761 + AZOBR_RS27575 0.15 +1.2 347,762 - AZOBR_RS27575 0.15 -1.9 347,956 + AZOBR_RS27575 0.35 -0.8 347,957 - AZOBR_RS27575 0.35 -0.5 347,957 - AZOBR_RS27575 0.35 -0.2 348,056 - AZOBR_RS27575 0.46 +0.0 348,325 + AZOBR_RS27575 0.74 -0.8 348,541 + -0.0 348,541 + +1.9 348,542 - +0.3 348,542 - +0.2 349,347 + +0.6 349,347 + +1.2 349,347 + -0.7 349,348 - +0.3 349,348 - +0.9 349,348 - -3.7 349,348 - -1.0 349,348 - +0.8 349,348 - +0.5 349,348 - -2.2 349,416 + +0.5 349,416 + +0.5 349,828 - AZOBR_RS27585 0.45 +0.6 349,828 - AZOBR_RS27585 0.45 -1.3 350,014 - AZOBR_RS27585 0.62 -0.3 350,058 + AZOBR_RS27585 0.66 +1.8 350,064 + AZOBR_RS27585 0.67 -1.2 350,064 + -0.3 350,070 + AZOBR_RS27585 0.67 +0.7 350,077 - AZOBR_RS27585 0.68 -2.3 350,077 - AZOBR_RS27585 0.68 -0.3 350,238 + +0.2
Or see this region's nucleotide sequence