Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27295 and AZOBR_RS27300 are separated by 608 nucleotides AZOBR_RS27300 and AZOBR_RS27305 are separated by 417 nucleotides
AZOBR_RS27295: AZOBR_RS27295 - hypothetical protein, at 266,596 to 267,804
_RS27295
AZOBR_RS27300: AZOBR_RS27300 - hypothetical protein, at 268,413 to 268,670
_RS27300
AZOBR_RS27305: AZOBR_RS27305 - hypothetical protein, at 269,088 to 270,512
_RS27305
Position (kb) 268
269 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 267.490 kb on + strand, within AZOBR_RS27295 at 267.565 kb on + strand, within AZOBR_RS27295 at 267.566 kb on - strand, within AZOBR_RS27295 at 267.637 kb on + strand, within AZOBR_RS27295 at 267.638 kb on - strand, within AZOBR_RS27295 at 267.638 kb on - strand, within AZOBR_RS27295 at 267.638 kb on - strand, within AZOBR_RS27295 at 267.670 kb on + strand, within AZOBR_RS27295 at 267.670 kb on + strand, within AZOBR_RS27295 at 267.670 kb on + strand, within AZOBR_RS27295 at 267.671 kb on - strand, within AZOBR_RS27295 at 267.671 kb on - strand, within AZOBR_RS27295 at 267.671 kb on - strand, within AZOBR_RS27295 at 267.725 kb on - strand at 267.868 kb on - strand at 268.031 kb on + strand at 268.031 kb on + strand at 268.032 kb on - strand at 268.032 kb on - strand at 268.032 kb on - strand at 268.032 kb on - strand at 268.053 kb on + strand at 268.056 kb on + strand at 268.755 kb on + strand at 268.755 kb on + strand at 268.756 kb on - strand at 268.756 kb on - strand at 269.265 kb on + strand, within AZOBR_RS27305 at 269.266 kb on - strand, within AZOBR_RS27305 at 269.295 kb on + strand, within AZOBR_RS27305 at 269.604 kb on + strand, within AZOBR_RS27305 at 269.604 kb on + strand, within AZOBR_RS27305
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 267,490 + AZOBR_RS27295 0.74 +0.5 267,565 + AZOBR_RS27295 0.80 -0.5 267,566 - AZOBR_RS27295 0.80 +1.3 267,637 + AZOBR_RS27295 0.86 +0.2 267,638 - AZOBR_RS27295 0.86 +1.5 267,638 - AZOBR_RS27295 0.86 +0.6 267,638 - AZOBR_RS27295 0.86 -0.1 267,670 + AZOBR_RS27295 0.89 +0.2 267,670 + AZOBR_RS27295 0.89 -0.4 267,670 + AZOBR_RS27295 0.89 -0.6 267,671 - AZOBR_RS27295 0.89 -0.1 267,671 - AZOBR_RS27295 0.89 +1.0 267,671 - AZOBR_RS27295 0.89 +1.2 267,725 - +1.3 267,868 - +0.7 268,031 + -3.4 268,031 + +1.3 268,032 - +0.3 268,032 - +0.3 268,032 - -0.4 268,032 - -1.1 268,053 + -0.8 268,056 + -0.1 268,755 + -0.1 268,755 + -0.1 268,756 - +0.8 268,756 - -0.4 269,265 + AZOBR_RS27305 0.12 +1.5 269,266 - AZOBR_RS27305 0.12 -0.6 269,295 + AZOBR_RS27305 0.15 +0.5 269,604 + AZOBR_RS27305 0.36 +1.5 269,604 + AZOBR_RS27305 0.36 +1.0
Or see this region's nucleotide sequence