Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26660 and AZOBR_RS26665 are separated by 40 nucleotides AZOBR_RS26665 and AZOBR_RS26670 are separated by 192 nucleotides AZOBR_RS26670 and AZOBR_RS26675 are separated by 5 nucleotides AZOBR_RS26675 and AZOBR_RS26680 are separated by 85 nucleotides
AZOBR_RS26660: AZOBR_RS26660 - signal peptidase II, at 129,467 to 129,997
_RS26660
AZOBR_RS26665: AZOBR_RS26665 - conserved hypothetical protein; putative signal peptide; twin-arginine translocation signal domain protein, at 130,038 to 130,688
_RS26665
AZOBR_RS26670: AZOBR_RS26670 - zinc transporter ZitB, at 130,881 to 131,759
_RS26670
AZOBR_RS26675: AZOBR_RS26675 - IclR family transcriptional regulator, at 131,765 to 132,649
_RS26675
AZOBR_RS26680: AZOBR_RS26680 - ABC transporter permease, at 132,735 to 133,655
_RS26680
Position (kb) 130
131
132 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 130.393 kb on - strand, within AZOBR_RS26665 at 130.507 kb on - strand, within AZOBR_RS26665 at 130.507 kb on - strand, within AZOBR_RS26665 at 130.641 kb on + strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.832 kb on + strand at 130.832 kb on + strand at 130.833 kb on - strand at 130.844 kb on + strand at 130.844 kb on + strand at 130.844 kb on + strand at 131.094 kb on + strand, within AZOBR_RS26670 at 131.094 kb on + strand, within AZOBR_RS26670 at 131.127 kb on + strand, within AZOBR_RS26670 at 131.128 kb on - strand, within AZOBR_RS26670 at 131.609 kb on - strand, within AZOBR_RS26670 at 131.973 kb on + strand, within AZOBR_RS26675 at 131.973 kb on + strand, within AZOBR_RS26675 at 132.129 kb on + strand, within AZOBR_RS26675 at 132.129 kb on + strand, within AZOBR_RS26675 at 132.129 kb on + strand, within AZOBR_RS26675 at 132.309 kb on + strand, within AZOBR_RS26675 at 132.310 kb on - strand, within AZOBR_RS26675 at 132.310 kb on - strand, within AZOBR_RS26675 at 132.316 kb on - strand, within AZOBR_RS26675 at 132.316 kb on - strand, within AZOBR_RS26675 at 132.349 kb on - strand, within AZOBR_RS26675 at 132.378 kb on + strand, within AZOBR_RS26675 at 132.685 kb on + strand at 132.686 kb on - strand at 132.691 kb on + strand at 132.691 kb on + strand at 132.692 kb on - strand at 132.692 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 130,393 - AZOBR_RS26665 0.55 +1.4 130,507 - AZOBR_RS26665 0.72 +1.5 130,507 - AZOBR_RS26665 0.72 -0.1 130,641 + +0.2 130,642 - -3.7 130,642 - -0.3 130,642 - -0.4 130,642 - +0.8 130,832 + +0.2 130,832 + +1.2 130,833 - +0.1 130,844 + -0.9 130,844 + -1.8 130,844 + -0.1 131,094 + AZOBR_RS26670 0.24 -0.2 131,094 + AZOBR_RS26670 0.24 -2.2 131,127 + AZOBR_RS26670 0.28 -1.3 131,128 - AZOBR_RS26670 0.28 +0.6 131,609 - AZOBR_RS26670 0.83 -3.9 131,973 + AZOBR_RS26675 0.24 -2.9 131,973 + AZOBR_RS26675 0.24 -3.8 132,129 + AZOBR_RS26675 0.41 -1.3 132,129 + AZOBR_RS26675 0.41 -1.6 132,129 + AZOBR_RS26675 0.41 +0.6 132,309 + AZOBR_RS26675 0.61 -4.0 132,310 - AZOBR_RS26675 0.62 -1.1 132,310 - AZOBR_RS26675 0.62 -0.5 132,316 - AZOBR_RS26675 0.62 -0.5 132,316 - AZOBR_RS26675 0.62 -1.4 132,349 - AZOBR_RS26675 0.66 -3.7 132,378 + AZOBR_RS26675 0.69 -0.3 132,685 + -0.9 132,686 - -0.9 132,691 + -4.0 132,691 + -0.7 132,692 - +0.2 132,692 - -0.6
Or see this region's nucleotide sequence