Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26655 and AZOBR_RS26660 are separated by 56 nucleotides AZOBR_RS26660 and AZOBR_RS26665 are separated by 40 nucleotides AZOBR_RS26665 and AZOBR_RS26670 are separated by 192 nucleotides
AZOBR_RS26655: AZOBR_RS26655 - ATPase, at 127,233 to 129,410
_RS26655
AZOBR_RS26660: AZOBR_RS26660 - signal peptidase II, at 129,467 to 129,997
_RS26660
AZOBR_RS26665: AZOBR_RS26665 - conserved hypothetical protein; putative signal peptide; twin-arginine translocation signal domain protein, at 130,038 to 130,688
_RS26665
AZOBR_RS26670: AZOBR_RS26670 - zinc transporter ZitB, at 130,881 to 131,759
_RS26670
Position (kb) 129
130 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 129.678 kb on - strand, within AZOBR_RS26660 at 130.393 kb on - strand, within AZOBR_RS26665 at 130.507 kb on - strand, within AZOBR_RS26665 at 130.507 kb on - strand, within AZOBR_RS26665 at 130.641 kb on + strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.642 kb on - strand at 130.832 kb on + strand at 130.832 kb on + strand at 130.833 kb on - strand at 130.844 kb on + strand at 130.844 kb on + strand at 130.844 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 129,678 - AZOBR_RS26660 0.40 +0.5 130,393 - AZOBR_RS26665 0.55 +1.4 130,507 - AZOBR_RS26665 0.72 +1.5 130,507 - AZOBR_RS26665 0.72 -0.1 130,641 + +0.2 130,642 - -3.7 130,642 - -0.3 130,642 - -0.4 130,642 - +0.8 130,832 + +0.2 130,832 + +1.2 130,833 - +0.1 130,844 + -0.9 130,844 + -1.8 130,844 + -0.1
Or see this region's nucleotide sequence