Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26395 and AZOBR_RS26400 are separated by 35 nucleotides AZOBR_RS26400 and AZOBR_RS26405 are separated by 81 nucleotides AZOBR_RS26405 and AZOBR_RS26410 overlap by 14 nucleotides AZOBR_RS26410 and AZOBR_RS26415 are separated by 14 nucleotides
AZOBR_RS26395: AZOBR_RS26395 - endoribonuclease, at 68,454 to 68,798
_RS26395
AZOBR_RS26400: AZOBR_RS26400 - ABC transporter substrate-binding protein, at 68,834 to 69,637
_RS26400
AZOBR_RS26405: AZOBR_RS26405 - amino acid ABC transporter ATP-binding protein, at 69,719 to 70,447
_RS26405
AZOBR_RS26410: AZOBR_RS26410 - amino acid ABC transporter permease, at 70,434 to 71,084
_RS26410
AZOBR_RS26415: AZOBR_RS26415 - ABC transporter permease, at 71,099 to 71,758
_RS26415
Position (kb) 69
70
71 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 68.835 kb on + strand at 68.835 kb on + strand at 68.910 kb on + strand at 68.998 kb on + strand, within AZOBR_RS26400 at 68.998 kb on + strand, within AZOBR_RS26400 at 68.999 kb on - strand, within AZOBR_RS26400 at 68.999 kb on - strand, within AZOBR_RS26400 at 69.088 kb on - strand, within AZOBR_RS26400 at 69.247 kb on - strand, within AZOBR_RS26400 at 69.247 kb on - strand, within AZOBR_RS26400 at 69.271 kb on - strand, within AZOBR_RS26400 at 69.271 kb on - strand, within AZOBR_RS26400 at 70.410 kb on + strand at 70.410 kb on + strand at 70.411 kb on - strand at 70.504 kb on + strand, within AZOBR_RS26410 at 70.505 kb on - strand, within AZOBR_RS26410 at 70.505 kb on - strand, within AZOBR_RS26410 at 70.687 kb on + strand, within AZOBR_RS26410 at 70.799 kb on - strand, within AZOBR_RS26410 at 71.178 kb on + strand, within AZOBR_RS26415 at 71.178 kb on + strand, within AZOBR_RS26415 at 71.178 kb on + strand, within AZOBR_RS26415 at 71.200 kb on - strand, within AZOBR_RS26415 at 71.200 kb on - strand, within AZOBR_RS26415 at 71.217 kb on + strand, within AZOBR_RS26415
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 68,835 + +0.5 68,835 + -1.9 68,910 + -3.7 68,998 + AZOBR_RS26400 0.20 -1.1 68,998 + AZOBR_RS26400 0.20 -0.1 68,999 - AZOBR_RS26400 0.21 +2.4 68,999 - AZOBR_RS26400 0.21 +0.5 69,088 - AZOBR_RS26400 0.32 -0.8 69,247 - AZOBR_RS26400 0.51 -0.4 69,247 - AZOBR_RS26400 0.51 +0.0 69,271 - AZOBR_RS26400 0.54 +0.2 69,271 - AZOBR_RS26400 0.54 -0.7 70,410 + -2.3 70,410 + +1.0 70,411 - +1.5 70,504 + AZOBR_RS26410 0.11 -0.1 70,505 - AZOBR_RS26410 0.11 +0.4 70,505 - AZOBR_RS26410 0.11 -1.5 70,687 + AZOBR_RS26410 0.39 -0.4 70,799 - AZOBR_RS26410 0.56 -0.3 71,178 + AZOBR_RS26415 0.12 +0.4 71,178 + AZOBR_RS26415 0.12 -0.4 71,178 + AZOBR_RS26415 0.12 +1.0 71,200 - AZOBR_RS26415 0.15 -3.9 71,200 - AZOBR_RS26415 0.15 -1.2 71,217 + AZOBR_RS26415 0.18 +0.8
Or see this region's nucleotide sequence