Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25910 and AZOBR_RS25915 overlap by 11 nucleotides AZOBR_RS25915 and AZOBR_RS25920 are separated by 49 nucleotides AZOBR_RS25920 and AZOBR_RS25925 are separated by 180 nucleotides
AZOBR_RS25910: AZOBR_RS25910 - oxidoreductase, at 868,117 to 868,890
_RS25910
AZOBR_RS25915: AZOBR_RS25915 - ATPase, at 868,880 to 869,446
_RS25915
AZOBR_RS25920: AZOBR_RS25920 - flavodoxin, at 869,496 to 869,963
_RS25920
AZOBR_RS25925: AZOBR_RS25925 - type II citrate synthase, at 870,144 to 871,427
_RS25925
Position (kb) 869
870 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 868.600 kb on + strand, within AZOBR_RS25910 at 868.600 kb on + strand, within AZOBR_RS25910 at 868.840 kb on + strand at 868.972 kb on - strand, within AZOBR_RS25915 at 868.987 kb on - strand, within AZOBR_RS25915 at 869.470 kb on + strand at 869.471 kb on - strand at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.694 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.696 kb on + strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.697 kb on - strand, within AZOBR_RS25920 at 869.733 kb on + strand, within AZOBR_RS25920 at 869.733 kb on + strand, within AZOBR_RS25920 at 869.734 kb on - strand, within AZOBR_RS25920 at 869.734 kb on - strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.736 kb on + strand, within AZOBR_RS25920 at 869.737 kb on - strand, within AZOBR_RS25920 at 869.737 kb on - strand, within AZOBR_RS25920 at 869.769 kb on + strand, within AZOBR_RS25920 at 869.970 kb on - strand at 869.990 kb on + strand at 870.003 kb on - strand at 870.003 kb on - strand at 870.024 kb on + strand at 870.024 kb on + strand at 870.025 kb on - strand at 870.025 kb on - strand at 870.025 kb on - strand at 870.034 kb on + strand at 870.034 kb on + strand at 870.035 kb on - strand at 870.075 kb on - strand at 870.238 kb on - strand at 870.275 kb on + strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.276 kb on - strand, within AZOBR_RS25925 at 870.309 kb on + strand, within AZOBR_RS25925 at 870.310 kb on - strand, within AZOBR_RS25925 at 870.381 kb on + strand, within AZOBR_RS25925 at 870.462 kb on + strand, within AZOBR_RS25925 at 870.462 kb on + strand, within AZOBR_RS25925 at 870.463 kb on - strand, within AZOBR_RS25925 at 870.499 kb on - strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.570 kb on + strand, within AZOBR_RS25925 at 870.571 kb on - strand, within AZOBR_RS25925 at 870.663 kb on + strand, within AZOBR_RS25925 at 870.694 kb on - strand, within AZOBR_RS25925 at 870.715 kb on - strand, within AZOBR_RS25925 at 870.732 kb on + strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925 at 870.733 kb on - strand, within AZOBR_RS25925
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 868,600 + AZOBR_RS25910 0.62 -3.3 868,600 + AZOBR_RS25910 0.62 -1.8 868,840 + -0.1 868,972 - AZOBR_RS25915 0.16 -0.2 868,987 - AZOBR_RS25915 0.19 +0.5 869,470 + -2.3 869,471 - +0.4 869,694 + AZOBR_RS25920 0.42 -1.9 869,694 + AZOBR_RS25920 0.42 +0.5 869,694 + AZOBR_RS25920 0.42 +0.7 869,694 + AZOBR_RS25920 0.42 +0.1 869,696 + AZOBR_RS25920 0.43 +0.1 869,696 + AZOBR_RS25920 0.43 -0.8 869,696 + AZOBR_RS25920 0.43 +0.3 869,696 + AZOBR_RS25920 0.43 +0.5 869,697 - AZOBR_RS25920 0.43 +1.8 869,697 - AZOBR_RS25920 0.43 -1.1 869,697 - AZOBR_RS25920 0.43 -0.2 869,697 - AZOBR_RS25920 0.43 -0.3 869,733 + AZOBR_RS25920 0.51 +0.2 869,733 + AZOBR_RS25920 0.51 +0.3 869,734 - AZOBR_RS25920 0.51 +0.6 869,734 - AZOBR_RS25920 0.51 +0.4 869,736 + AZOBR_RS25920 0.51 -1.5 869,736 + AZOBR_RS25920 0.51 +0.5 869,736 + AZOBR_RS25920 0.51 +0.8 869,737 - AZOBR_RS25920 0.51 -0.4 869,737 - AZOBR_RS25920 0.51 +0.4 869,769 + AZOBR_RS25920 0.58 +0.3 869,970 - +0.9 869,990 + -2.2 870,003 - -0.3 870,003 - +0.1 870,024 + -1.5 870,024 + +1.4 870,025 - +0.1 870,025 - -1.8 870,025 - -1.3 870,034 + -0.2 870,034 + +0.4 870,035 - -4.0 870,075 - -0.3 870,238 - +0.5 870,275 + AZOBR_RS25925 0.10 +0.7 870,276 - AZOBR_RS25925 0.10 -1.5 870,276 - AZOBR_RS25925 0.10 -0.7 870,276 - AZOBR_RS25925 0.10 +0.6 870,309 + AZOBR_RS25925 0.13 -0.3 870,310 - AZOBR_RS25925 0.13 +0.9 870,381 + AZOBR_RS25925 0.18 +0.5 870,462 + AZOBR_RS25925 0.25 -0.4 870,462 + AZOBR_RS25925 0.25 -1.5 870,463 - AZOBR_RS25925 0.25 +0.9 870,499 - AZOBR_RS25925 0.28 +0.6 870,570 + AZOBR_RS25925 0.33 -0.1 870,570 + AZOBR_RS25925 0.33 +0.2 870,570 + AZOBR_RS25925 0.33 +0.3 870,571 - AZOBR_RS25925 0.33 +1.2 870,663 + AZOBR_RS25925 0.40 +1.1 870,694 - AZOBR_RS25925 0.43 +1.5 870,715 - AZOBR_RS25925 0.44 +0.5 870,732 + AZOBR_RS25925 0.46 +0.5 870,733 - AZOBR_RS25925 0.46 -0.4 870,733 - AZOBR_RS25925 0.46 +1.1 870,733 - AZOBR_RS25925 0.46 +1.0 870,733 - AZOBR_RS25925 0.46 +0.5
Or see this region's nucleotide sequence