Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23680 and AZOBR_RS23685 are separated by 787 nucleotides
AZOBR_RS23680: AZOBR_RS23680 - hypothetical protein, at 346,621 to 347,577
_RS23680
AZOBR_RS23685: AZOBR_RS23685 - AsnC family transcriptional regulator, at 348,365 to 348,826
_RS23685
Position (kb) 346
347
348 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 345.692 kb on + strand at 345.693 kb on - strand at 345.693 kb on - strand at 345.708 kb on - strand at 345.785 kb on + strand at 345.785 kb on + strand at 345.852 kb on - strand at 345.852 kb on - strand at 345.852 kb on - strand at 345.867 kb on - strand at 345.867 kb on - strand at 345.971 kb on + strand at 345.972 kb on - strand at 345.972 kb on - strand at 345.972 kb on - strand at 345.972 kb on - strand at 345.972 kb on - strand at 346.070 kb on + strand at 346.071 kb on - strand at 346.121 kb on + strand at 346.122 kb on - strand at 346.430 kb on + strand at 346.617 kb on - strand at 346.617 kb on - strand at 346.968 kb on - strand, within AZOBR_RS23680 at 347.022 kb on - strand, within AZOBR_RS23680 at 347.022 kb on - strand, within AZOBR_RS23680 at 347.270 kb on + strand, within AZOBR_RS23680 at 347.270 kb on + strand, within AZOBR_RS23680 at 347.708 kb on + strand at 347.708 kb on + strand at 347.708 kb on + strand at 347.708 kb on + strand at 347.709 kb on - strand at 347.874 kb on - strand at 347.880 kb on + strand at 348.091 kb on + strand at 348.160 kb on - strand at 348.181 kb on - strand at 348.352 kb on + strand at 348.352 kb on + strand at 348.353 kb on + strand at 348.353 kb on - strand at 348.354 kb on + strand at 348.355 kb on - strand at 348.355 kb on - strand at 348.412 kb on - strand, within AZOBR_RS23685 at 348.472 kb on - strand, within AZOBR_RS23685 at 348.508 kb on - strand, within AZOBR_RS23685 at 348.508 kb on - strand, within AZOBR_RS23685 at 348.508 kb on - strand, within AZOBR_RS23685
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 345,692 + -1.4 345,693 - -1.7 345,693 - +1.3 345,708 - +0.6 345,785 + -3.7 345,785 + +0.2 345,852 - +0.0 345,852 - +2.0 345,852 - +0.2 345,867 - +0.0 345,867 - -0.5 345,971 + +1.5 345,972 - -0.5 345,972 - +1.3 345,972 - -1.5 345,972 - -2.4 345,972 - -1.6 346,070 + -0.3 346,071 - -1.9 346,121 + +0.2 346,122 - +1.7 346,430 + -2.1 346,617 - -1.9 346,617 - -1.4 346,968 - AZOBR_RS23680 0.36 +2.0 347,022 - AZOBR_RS23680 0.42 -0.1 347,022 - AZOBR_RS23680 0.42 +1.0 347,270 + AZOBR_RS23680 0.68 -0.0 347,270 + AZOBR_RS23680 0.68 -0.9 347,708 + +0.1 347,708 + +1.1 347,708 + -0.4 347,708 + -0.7 347,709 - -0.3 347,874 - +0.1 347,880 + -1.4 348,091 + +1.1 348,160 - -1.2 348,181 - +0.1 348,352 + -1.2 348,352 + +0.1 348,353 + +1.0 348,353 - -3.0 348,354 + -1.2 348,355 - +0.8 348,355 - -0.8 348,412 - AZOBR_RS23685 0.10 -0.9 348,472 - AZOBR_RS23685 0.23 +0.4 348,508 - AZOBR_RS23685 0.31 -1.1 348,508 - AZOBR_RS23685 0.31 -2.0 348,508 - AZOBR_RS23685 0.31 -4.5
Or see this region's nucleotide sequence