Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23545 and AZOBR_RS23550 overlap by 1 nucleotides AZOBR_RS23550 and AZOBR_RS23555 are separated by 168 nucleotides AZOBR_RS23555 and AZOBR_RS23560 are separated by 107 nucleotides AZOBR_RS23560 and AZOBR_RS23565 overlap by 4 nucleotides
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
AZOBR_RS23550: AZOBR_RS23550 - tetrathionate reductase subunit B, at 314,184 to 314,936
_RS23550
AZOBR_RS23555: AZOBR_RS23555 - beta-lactamase, at 315,105 to 315,995
_RS23555
AZOBR_RS23560: AZOBR_RS23560 - LysR family transcriptional regulator, at 316,103 to 316,978
_RS23560
AZOBR_RS23565: AZOBR_RS23565 - D-threo-aldose 1-dehydrogenase, at 316,975 to 317,925
_RS23565
Position (kb) 315
316 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.115 kb on - strand at 314.507 kb on - strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.528 kb on - strand, within AZOBR_RS23550 at 314.656 kb on + strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.689 kb on + strand, within AZOBR_RS23550 at 314.986 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand at 315.193 kb on + strand at 315.193 kb on + strand at 315.193 kb on + strand at 315.194 kb on - strand, within AZOBR_RS23555 at 315.201 kb on - strand, within AZOBR_RS23555 at 315.667 kb on + strand, within AZOBR_RS23555 at 316.065 kb on + strand at 316.886 kb on + strand, within AZOBR_RS23560 at 316.976 kb on + strand at 316.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 314,114 + +1.9 314,114 + -0.5 314,114 + -0.4 314,114 + +2.3 314,115 - -0.1 314,507 - AZOBR_RS23550 0.43 -1.2 314,527 + AZOBR_RS23550 0.46 +0.3 314,527 + AZOBR_RS23550 0.46 -0.1 314,527 + AZOBR_RS23550 0.46 -0.6 314,528 - AZOBR_RS23550 0.46 +0.5 314,656 + AZOBR_RS23550 0.63 +0.6 314,657 - AZOBR_RS23550 0.63 -1.0 314,657 - AZOBR_RS23550 0.63 -1.7 314,689 + AZOBR_RS23550 0.67 +0.6 314,986 + -4.6 315,047 + +1.0 315,047 + +0.1 315,047 + -0.6 315,193 + +0.1 315,193 + +0.1 315,193 + -0.1 315,194 - AZOBR_RS23555 0.10 -0.3 315,201 - AZOBR_RS23555 0.11 -0.9 315,667 + AZOBR_RS23555 0.63 -3.8 316,065 + -0.1 316,886 + AZOBR_RS23560 0.89 -1.2 316,976 + -1.3 316,977 - +0.7
Or see this region's nucleotide sequence